Cephus cinctus (wheat stem sawfly): 107273306
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Entry
107273306 CDS
T07523
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03030
DNA replication
ccin03420
Nucleotide excision repair
ccin03430
Mismatch repair
ccin03440
Homologous recombination
ccin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107273306
03420 Nucleotide excision repair
107273306
03430 Mismatch repair
107273306
03440 Homologous recombination
107273306
03460 Fanconi anemia pathway
107273306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccin03000
]
107273306
03032 DNA replication proteins [BR:
ccin03032
]
107273306
03400 DNA repair and recombination proteins [BR:
ccin03400
]
107273306
Transcription factors [BR:
ccin03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107273306
DNA replication proteins [BR:
ccin03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
107273306
DNA repair and recombination proteins [BR:
ccin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
107273306
MMR (mismatch excision repair)
107273306
DSBR (double strand breaks repair)
HR (homologous recombination)
107273306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
107273306
NCBI-ProteinID:
XP_015606859
UniProt:
A0AAJ7CBQ6
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MGSLTEGAIDNIMNGIDVEKPVLQILGNKKLSTSSTGERYRLLVSDGVRINSFTMLATQL
NHLVTENILSEYSICRIDRYAISMVNNGGKQKRVMVILSIDVIKPGSEVGRKIGNPMTQD
GNPESESASSNVKAVSPPKAKTIKPYVPSHNISTTDISTTPIAGLSPYQNRWVIKVRVTS
KPPIRTWSNSRGEGKLFSMDLLDESGEIRCTGFKEQCDKFYDMIEVGKIYYISRCALKPA
NKKFSSLNNDYEMTLTNDSEIIPCDDASTDIPTIQYNFCPISEVESKAKDELIDVIGVCK
SYNDVQTLVSRATQKELKKRDVELVDESNLSVTLTLWGTQAIDFDGSNNPVLAIKGVRIG
EFNGGKNLSLLGSSNMTIEPDLPEAHKLRGWYNTTGKMQETKSLSKVLGGGGSNSFNGPI
LCFKEAVDLGLGRNDSADYYVVKATVNMVRAENSLYKACPTEDCKKKVVDQSNDMYRCEK
CDRDYPNFKYRLLASANLVDWSGNVWATAFSEEGEKLLGVTAQELGELKENDSDAFLEKF
AQISFNSFMFKLRVKMEVFSDEARLKTTITAVSPLDFKEYNKFLISKIKELANIGKSE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgggttctctaacggaaggagcaatagataacatcatgaatggtatcgatgtagagaaa
ccagtattgcaaatcttgggaaataaaaaactatccacatcaagtactggagagcgatac
agattactggtatcagatggtgtgcgaatcaattcatttactatgctggctacacaacta
aatcatttggtcactgaaaatatcctgtctgaatacagtatttgtcgaatagatagatat
gcaatcagcatggtcaataatggtgggaaacaaaaacgagtcatggtcatattaagcatt
gatgttataaagcctggtagcgaagtgggtagaaaaattggaaatccgatgactcaagat
ggcaatccggagtctgagtcagcttcatccaatgtcaaagcagtatcacctccaaaagct
aaaactattaagccatatgtaccaagtcataatatttctactactgacatttctacaaca
ccaatagctggtcttagtccatatcagaacagatgggtcatcaaggttcgtgtaactagc
aaacccccaattagaacttggagtaattctcgaggtgaaggcaaattattttccatggac
cttcttgatgaaagtggggagatcagatgtactggcttcaaagaacagtgtgataaattt
tatgatatgatagaagttggcaaaatatattacatctcacggtgtgctctgaaaccagcc
aacaagaaattttcatctttaaacaatgattatgaaatgactttaactaacgattctgaa
ataattccttgcgatgatgcaagtacagacattccaacaatccagtacaacttctgtcct
ataagcgaagtggagagtaaagctaaggacgaactcattgatgtgataggagtctgcaaa
tcgtacaatgatgttcagacgttagtttctagagcaacgcaaaaggagctaaagaaacga
gatgtcgagttggtagacgaaagcaacctttctgttactctcacattgtggggcacgcaa
gctatagattttgatggttcaaataatcctgtattagcaatcaagggtgtacgtatcggt
gaatttaatggtggtaaaaatttatcgcttctcggttcttctaatatgaccatcgaacca
gatctaccagaagctcacaaattgcgtggatggtacaatacaactggcaaaatgcaagaa
acgaaatccttgtccaaggtacttggtggtggcggatctaattcgttcaatgggccgata
ttgtgctttaaggaagcagtagatctgggacttggtcgtaatgattcggctgattactat
gttgttaaggctactgtgaatatggtacgagcagaaaattcactctacaaagcatgtccc
actgaagactgcaaaaagaaagtggttgatcaatcaaatgacatgtacagatgcgaaaaa
tgtgacagagattatcccaattttaaatatcgtttgctggctagtgcaaatttggttgat
tggtcaggcaatgtttgggctacagccttcagtgaggaaggagagaaactactgggagtt
accgctcaggaacttggtgaactgaaagagaatgattcggacgcttttcttgagaaattc
gcgcagatttctttcaattcatttatgtttaagctacgcgttaaaatggaggtgttcagc
gatgaagccagattgaaaacaacaattaccgcggtgtcgccacttgattttaaagaatat
aataaattcttgatctcgaagataaaggaactcgcaaacattggcaaatctgaataa
DBGET
integrated database retrieval system
