Cephus cinctus (wheat stem sawfly): 107273339
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Entry
107273339 CDS
T07523
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107273339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccin03019
]
107273339
Messenger RNA biogenesis [BR:
ccin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107273339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
107273339
NCBI-ProteinID:
XP_015606920
UniProt:
A0AAJ7RUA4
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MSRHRDVRSMNYSDEYDGYDDVYGHSVEDDYCVSPSAEQFMFDRNKRQNIASYFTEEDIV
EGNEDMDNTTTLVPPGTSFTHKSTELSNLDAAKLSSCIEAIRNVIGDTVSDSTLIEKILQ
SNFNTEAALDAILKESSPKDTTDCVANSEQPDAYQGNKTASKAAPFQTGVSPAVRVVPAA
TRSIVKGFDLSGSDNSDLVHSRISSSSRSQSPSSGQNSPDIKRKDDQNQKDKRTLIVSSS
KSNTPSRCQSPASGRATPESESKCREKSLSIENKIDAMTAYRKKRGDAKEQLHLVVVGHV
DAGKSTLLGRLLCDLDQVPARLIHKYQQESKKIGKQSFAYAWVLDETGEERERGITMDVG
HSKFETATKSVTILDAPGHKDFIPNMITGATQADVALLVVDATRGEFETGFDSGGQTREH
ALLLRSLGITQLAVVVNKLDTVGWSKERFNEIVEKMNIFLKQAGFRDAVPFVPCSGLSGE
NLVMEPKEEGLSSWYTGPTLVSVIDSFKCPERPINKPFRFSVNDIFKGTGSGFCVSGHVE
TGMVSVSDKVLVLPYNEVALVRGLQIDDISITSAFAGDHVALTLSGIEQQSVAVGDILCT
PQYPVRTTTRFEAHIVLFAVATPITKGLPVVMHQQSLVEPAVIVRLIAQLHRGTGEIIKK
KPRCLPKNSSAIVEIRTQRPIGMELYKDVKQLGRVMLRVAGTTVAAGLVTKIY
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcatcgggatgtacgatctatgaattattcagatgaatatgatgggtatgac
gatgtttatggtcattctgttgaggatgattattgtgtttctcctagtgccgagcaattc
atgtttgaccgaaataaacggcaaaatattgcctcttacttcacggaagaagatattgtt
gagggtaatgaggacatggataacacaacaactttagtaccacctggaacttcttttact
cacaaaagcacagaactttcaaatttggatgcagccaaattgtcatcttgcatcgaagcc
attagaaatgtgataggtgacacagtttctgactcaactctcattgaaaagattctgcaa
tcaaacttcaatacagaggcagcactggatgcaattttaaaagaatcttcaccaaaggat
acgaccgattgtgtggccaattcagaacaaccagatgcatatcaaggtaataagacagcc
tcgaaggcagcaccgttccaaaccggagtgtctcctgcagtaagggtggttccagctgca
acacggtccatcgttaaaggattcgatttaagcggctccgacaattctgacctcgtgcac
tccagaattagcagcagctcacgctcgcagagtccgtcatccggtcaaaattctccggat
atcaaacgaaaggacgatcaaaatcaaaaagacaaaaggaccttgatcgtttcctcttca
aaatcaaatacgccgtcgagatgtcagtcgccggcttcaggtcgtgcaacgcccgagtcc
gaatccaaatgtcgagaaaaaagtctaagcatcgagaataaaatcgacgcgatgacagcc
tataggaagaagcgtggcgatgcaaaggaacagttgcatcttgtggtcgtcggacacgta
gacgcaggtaagagtaccctgctcgggagacttctttgcgacctggaccaagtgcccgca
agacttattcacaagtaccagcaagagagcaagaaaattggcaagcaatcattcgcgtac
gcatgggtcctcgacgagactggcgaggaaagagaacgtggtattacaatggacgtggga
cattcgaaattcgaaactgccaccaagtctgtcacaatcttggatgcacctgggcacaaa
gactttataccgaatatgatcaccggtgctacgcaggccgacgttgccttgctggtggtt
gatgcaactcggggtgaatttgaaacaggatttgacagtggtggacagactcgagaacac
gcgctattgttacgctctcttggcatcacccaattggcagtagtggttaacaaactggat
acggttggatggtcaaaggaaagatttaatgagatagtcgaaaagatgaatatctttctg
aagcaggctgggttcagggatgctgtgccttttgtaccttgtagcggtttgtcgggcgaa
aatttggtcatggaacctaaagaggaaggattgtcaagttggtatacaggcccgacactg
gttagcgtaatcgacagtttcaaatgtcctgaacgacctataaataaaccatttcgcttc
tccgtcaatgatatattcaaaggaactggttctggattttgtgtttccggtcacgttgaa
actgggatggtttccgtgagtgacaaggtccttgtattaccctacaatgaagttgcgctc
gtaagaggtttgcaaattgatgacatttcaataacgagcgcgttcgccggcgatcatgtg
gcattgactttatcgggtatcgaacagcagagtgttgctgtgggagacattctttgcact
cctcaatatcctgtgcgaacaacgacgcgattcgaagcacatattgttctattcgcggtc
gcgacaccaattaccaaaggccttccagtggtgatgcatcaacaatccctcgttgaaccg
gcagtcatagtcagattgatagcacaacttcacagaggtaccggcgaaattattaaaaaa
aaaccacgatgccttccaaaaaactcgagcgcaatagttgaaatcagaacacaacggccg
attggtatggaattgtacaaagatgtaaagcagcttggcagggtaatgcttcgcgttgca
ggtaccactgttgcagctggtttggttaccaagatatattaa
DBGET
integrated database retrieval system