Cephus cinctus (wheat stem sawfly): 107273359
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Entry
107273359 CDS
T07523
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107273359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccin03019
]
107273359
Messenger RNA biogenesis [BR:
ccin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107273359
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107273359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
107273359
NCBI-ProteinID:
XP_015606956
UniProt:
A0AAJ7FT49
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MANLNFEQPPRSIANASLTSRGAGGGGLSSSTLTGHVTPTSGMFSGSSASTSSTSNSTVV
GANVYPGATASGAAQSAAHQPQQQQLSPMGSRGLFGQRAFTDRRTMPALGNSNPMGSMGS
FGIPPSRSYGSQGAINNFHSVFGSGGGGDTSTPPLLDLSEFPSLTNRGQGDSMPQPSPMT
GKQPYVGMVKQPTSEASEFTMSSEDFPALPGTQSREGPSPGGSVSGDKGLPVGLGPEIGQ
DVLQANRAPGSEKSQASKRGIQTSPDGKVTHIPASMVKDQFGMVGLLTFIRAAETDPNLV
SLALGQDLTALGLNLNSPENLYQNFGGPWAETPCRPQDIDFHVPPEYLINASIRDKLAPV
KLNRYKDDLLFYMFYTNVGDVLQLAAAAELYSREWRYHMEEKVWITQAPGLGLVEKTSTY
ERGTYYYFDAQNWRKVAKEFHLDYTKLESRPHLPTTFHQSQP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggccaacttgaactttgagcagccgccacgcagtatcgcgaacgcaagcttaacttcg
cgtggggctggtggggggggcttaagctcgtcgacccttacgggtcatgtcacgcccacc
tcgggcatgttctcaggatcctctgcaagcacatcgagcacatcaaactctacggttgtc
ggtgccaacgtctatcccggtgccacggcttccggagctgcgcaatccgctgcgcaccag
cctcaacagcaacagctttcacctatgggcagcagaggactcttcgggcagagggctttc
actgacagacgtacaatgcctgctcttgggaattcaaatccaatgggtagtatgggcagt
tttggaatacctccaagtcgtagctacggatctcaaggtgcgatcaacaatttccactct
gtgtttgggagcggaggtggcggggacaccagtactcctcctctcctggacctctcggag
tttccctcgctgacgaatcgtggccagggtgactctatgcctcagcctagtcctatgacg
gggaaacaaccttacgtgggtatggtaaagcaaccgacgtccgaggcgagtgaatttact
atgagttcagaggacttccctgcgttgccaggtacgcaaagcagggaaggaccatctcct
gggggtagtgtctctggtgataaaggtttacctgtgggacttggtcctgagattggtcag
gacgtactccaggcgaatagagcaccgggttcggaaaagtctcaggcatctaaaagaggc
atccaaacatcacctgacggtaaagtgacgcatataccggctagtatggtaaaggatcaa
tttggtatggttggtttattgacctttataagagcggcggaaacggatccgaaccttgta
tctctagcacttggacaggatttaacagcattaggactaaatcttaattcacctgagaat
ctttatcagaattttggcggtccctgggcggaaacgccttgtcgacctcaagatatcgac
tttcacgtaccacctgaatatctaatcaatgcctccatcagggataaattggcacccgtt
aagctaaaccggtataaggacgatctcctattttatatgttttatacgaatgtcggagat
gtattacaactggcagctgctgcggaactatacagccgagagtggcggtatcacatggaa
gagaaggtatggatcacgcaggcgccgggtcttggacttgttgaaaagacttcgacgtac
gaacgcggtacttattactacttcgatgcgcagaactggaggaaggtcgccaaggagttc
catttggattacacgaagctggagagtagaccgcaccttcctacgacctttcaccaatcc
cagccttga
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