Cephus cinctus (wheat stem sawfly): 107274975
Help
Entry
107274975 CDS
T07523
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107274975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccin03021
]
107274975
03019 Messenger RNA biogenesis [BR:
ccin03019
]
107274975
Transcription machinery [BR:
ccin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107274975
Messenger RNA biogenesis [BR:
ccin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
107274975
U7-dependent histone pre-mRNA processing factors
107274975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
E2F_CC-MB
Motif
Other DBs
NCBI-GeneID:
107274975
NCBI-ProteinID:
XP_015610116
UniProt:
A0AAJ7FVB4
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MDPRIHRRSEPEKGPGDLVVEWLNEASLGSNDTVKVSNLLKVQEILIHKEPQLLNLYLDE
ALQFSLDRNSEVRKTVAGFIEEAGAKQPEVIPRMVQTLSRLVSDDAPLVAKRALRASGRI
LRSTLKWVASATLVTPEMETAWTQLSSLKVQIINMIDSDNDGIRTQAVKFLEGVVLIQTY
PDPDAPRKLEDFSLEDVPLTLKIARRRKLEEEANHVMDLLIKFHGSPHVSSVNLMTCMGS
LALIAKTRPQFMPVVIQALQRLQHDFPPTLSDSQVTSVQKQLKLTLLGLLKHPASIEFAS
SMARQLSQLGAKEQEIIKAYPKPEDIRRMKKRQQESVAAASAAKRAKLEVPIAVASEEPE
GVAAPVQPAKQPEVTELSESFIAERLSVEIATDLVMGSMARVPDIMTTVFQREYQPSSSA
DTSVQRQTIAKLLAAQIKQSKTKKMKKETKEEDAVMEDLVKNPSITVAEAKRERKREKDR
EKEKEAKASIEAHEKSLVKARNRLKALKLSEVTKPLSKEIREKMLLMAVNRILQAEKIAV
HGGVAPVRSKILTTLAATFNPYIKEAVLRYITDDMRTRLELALGWLYEEYALLQGFQRRT
TLCTKPHEAPHQAYNFLLCTLVSAIDLIQGKDRDTLLSRLYLEAPLITEDAVEALKMVSS
DETRGLAPLQLLKEMVIRRPTKQLVFLNVLLCHTGHENCTIREAAIQSVVELYNRPELNK
LIEEYAVLYLGFLRLQSPPEIVFGQDRGRPQPEDLWSESTTRTCLGLYLALLTEHQDLIH
ELARVYTSMGADVKRMVLRLVEGPVRSLGMGSPQLLALVENCPKGAETLVTRIIHILTEK
SAPSAELVARVRELYQTRVSDVRFLIPVLNGLTKKEVIAALPKLIKLNPIVVKEVFNRLL
GTHNNDSGVPHTSPITPAELLIALHTIDPNKAELKTVIKATSLCFAEKQAYTQEIVAVVM
QHLMELTPLPTLLMRTVIQSLALYPRLSGFVMNILQRLILKQVWKQPKVWEGFVKCCERT
QPQSFAVILQLPPTQLSEALKMAPGLKAPLLAHVESFAENQKAHIPQSIMDVIQGKSLME
AHDEFDIAPPGDYPLEQQADCMEIDLSEPAPPGLD
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcgaatacataggagatctgagccagaaaaaggcccgggcgatttggttgta
gaatggttaaacgaggcctcgttgggttctaacgatacagtaaaggtatcaaaccttttg
aaagtccaggaaattcttatacacaaagaaccacagttgttgaatttatatctagatgag
gctttacaattttccttggatagaaattctgaggttagaaagactgttgctggatttatt
gaagaagctggagcaaagcagcctgaagtaattcctagaatggtccaaactctttcaaga
ctcgtatcagacgatgctccacttgtagcgaaaagagctttaagagccagtggtaggatt
ctcaggtctacgcttaaatgggtagcaagtgccactttagttacaccggaaatggaaact
gcttggacacagttaagctccttgaaggtccaaataatcaatatgatagacagcgacaat
gatggtattaggacgcaggctgtaaaattccttgaaggtgttgtgttgatccaaacctat
cctgatccggatgcaccaagaaaactagaagatttctctcttgaggacgtacctctgaca
ttgaaaatcgctcgcaggagaaaactcgaggaagaggctaatcacgttatggacttatta
ataaagtttcacggttcgccacatgtcagtagcgttaatctcatgacctgtatgggatct
ctcgcactgatcgccaaaactaggccacagtttatgccggtcgttattcaagctctgcaa
agattgcagcatgatttcccgcctactctgtcggattctcaagtaacgagcgttcaaaaa
caattaaaactcacattgttggggctgcttaagcatccagctagtatagaatttgcatca
tcaatggcaagacaattatcgcagctcggcgctaaggaacaggaaataatcaaagcgtat
ccaaagccagaggatataaggcgtatgaagaaaagacaacaggaatcagttgctgcagct
tcagcggctaagcgtgctaaactagaagtaccaatagcagtagcgtcagaagaaccggaa
ggggtagctgcgccagtgcaaccagcgaagcaaccggaagtaacagaactttcagaaagt
tttatcgcagagcgacttagcgtagagattgcgactgacttagttatgggaagcatggct
cgagtaccggatatcatgaccaccgtttttcaacgcgaatatcagccaagctccagtgct
gatacaagcgtgcagcgacagactatagcaaagttactagcagctcagattaagcagagt
aagacaaaaaagatgaaaaaggaaactaaggaagaggatgccgttatggaggacctggtg
aagaacccatcgataactgtagcggaagctaagagggaacggaagcgcgagaaggacagg
gagaaagagaaggaagccaaagcttctatagaggctcatgagaagtcactagtgaaggcc
agaaaccgtttgaaggcattaaaattatcggaagtgacaaaaccattgtccaaggaaata
agggaaaaaatgcttcttatggccgtcaatagaatcctacaggctgaaaagatcgccgtt
cacggaggggtcgctcctgttaggtccaaaattctcaccaccctggcagccactttcaat
ccctacattaaggaagctgtactgagatacattacggatgatatgagaactcggcttgaa
cttgccctgggctggttgtacgaggagtatgctcttctgcaaggattccagaggagaacc
accttatgcacaaaacctcatgaagctccccatcaggcttataatttcttgctctgtacc
ctggtctctgctattgatctaatacagggaaaagatcgtgatacactgctttctagattg
tatctggaggctcctttgatcacagaggatgccgtagaagcattgaagatggtgtcctct
gatgagaccagaggtttggcgcctcttcaattattaaaagaaatggtgatcaggaggccc
actaagcaactagtttttcttaatgtacttctctgtcatactggacatgagaattgcacg
ataagagaagcggctatccaatcagtagtagaactatataacagaccagagctcaataaa
ctcatagaggaatatgctgtgctttatttgggattcctgagacttcagagcccacctgaa
attgtatttggacaggatcgtggcagacctcagcctgaggatctgtggtcagaatccacc
acgagaacctgtctaggtctctacttggcactcttaacagaacaccaggatcttattcac
gagttggccagagtgtatacttcaatgggtgccgacgttaagaggatggttttaagactt
gtcgaaggtccggttcgctctctgggtatgggcagtccgcaactgctagcgctagttgag
aattgtccaaaaggagcagaaaccctggttaccaggatcatacacatcctcaccgagaaa
tctgctcctagtgctgaactcgtcgctagagtacgagaactttatcagacccgagtgtca
gacgtgagatttcttattcctgtactgaatggtttaacgaagaaggaagtaatagctgct
ttaccaaaattgataaagctcaatccgatagttgtaaaagaggtattcaatagacttttg
ggtacgcataacaatgacagcggagtgccacacacatctccaattacaccagcagaactt
cttattgcattgcacactatcgatcctaataaggctgaactgaagacagtcataaaagcc
acttctctttgctttgctgaaaaacaagcctatactcaagaaattgttgctgttgtaatg
caacatctcatggagctaactcctctaccaacattattaatgcggactgttattcaaagt
ctagcattgtatccaagattgagtggctttgtaatgaacatcctccagcgtctaatacta
aaacaagtgtggaagcagccgaaagtttgggaaggttttgtcaagtgctgtgaacgtacg
cagcctcaaagttttgcagtgatattacaactgccaccaactcaattatcagaagcatta
aaaatggcacctggtctcaaagcacctttgttggctcacgtcgagtcttttgctgagaat
cagaaggcccacattccacagtccataatggacgtgatacaaggaaagtcgttaatggaa
gctcacgacgaattcgatattgcaccacctggagattatccacttgagcagcaggcagat
tgtatggaaattgatttatcggaaccagcacctcctggtttggactaa
DBGET
integrated database retrieval system
