Cephus cinctus (wheat stem sawfly): 107275060
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Entry
107275060 CDS
T07523
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X3
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107275060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccin03019
]
107275060
Messenger RNA biogenesis [BR:
ccin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107275060
mRNA degradation factors
5'-3' decay
Decapping complex
107275060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
107275060
NCBI-ProteinID:
XP_015610294
UniProt:
A0AAJ7CHY8
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MEVSEDPGCFGKMIKPRQEIRPYEYPQTVEFSGQEDQHSIELDSTNVTIIPSSGGHDHGS
SKVKLKNIVDFTWEHRFYTGQLLAVHMSGKYLAYGIKAASGGGMVRVVNKEMEQRALLRG
MNGSIQDLAFAHISHAILACVDYIGCLFVYSIESTSTKLVCNLILQVDAEDISPTSHRVI
WCPYIPEDESGDSDEVSKLLVLTRGSKAELWSIANVAARKGPGPIQATDHTIKETGGMLE
ISQHTGAIIEATFSPDGTALATASLDGEVKFFQVYMHGNSCAGQTQPRCLHQWRPHDGRP
ISCLFFLDDHKSYQPDAQFWRFAITGCDNNSELKVWSCELWTCLQTIKFEPTPTTGKMPV
LKAGLDLSAGYLLLSDIYNKVLYILSLAKDSGEALACVSTVSEFLLPYPILSFGIVDAGQ
RRVRPTGESLEDLCPCEDDIEDQLVVRMYLVQPKSLQECHIAFRPATHVSGSCLMDTLTH
DSLDYSEDLPDMGTVNHNGNAEEENGEEDRSVSTTMEASANHNAGLNLMTPDAFSSPAKK
DGNTLDSNPASPDLENVLSGSPSLAQAVQALNASDPPLATSEVEEQAPASGGSSPSREVR
EILSLAEPEPEEEVKPEFVLDDDDIWEHTPPVLLKDVSVHAMQETEEFPEEEDNDERRTL
SKAGVESNVGLNTADKNWRMTNDSHMLALNRKLDSLLETVQNQRQELRELRTEVTRLRQT
TPVTTRIESALTRASQQQNASLEQAMHSQLTRQQEVLSSLENTIKEKIFTSLPRMLEYGV
EPLRHQLAQIDDVLKDSLTELINGSQLKDTLALVAANSAKTALDIAFKESFTNVLLPGME
RACQNMFRQVQDAFAKGTQEYLQKVEQLLIKQAQRNNEQQSAILATSVREELQNELTRGL
SAIQEGTARTVRDSIREHLNQHFTELSGARSRATTPGIPVPAVADAQARVLSLLQRGQLN
AAFQQALSASDLGLVVLVCDRTEPSRVFSCPLGPQGQGSRCILQQPVILSLVQQLSADLG
HRTELKHRWLEEAILNLDPTDPVTREHMGNVLMTLQNQLATFVAANPNHRSARRMKMLAM
GARALLNQHP
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggaagtttcagaagatccaggctgctttggcaagatgatcaaaccaagacaggaaatt
aggccctatgaatatccacagactgtggaattcagtggtcaagaggatcagcattccatt
gagttggacagtaccaatgttaccattattccatcatctggaggtcatgatcatggcagt
tcgaaagtcaaattgaaaaatatagtagatttcacatgggaacataggttctacacaggg
cagctattagctgttcatatgtcagggaaatatcttgcctatggcatcaaagctgcatct
ggcgggggtatggtcagagttgttaataaagaaatggaacaaagagcattattgagaggc
atgaatggatccatacaagatcttgcctttgcccacatctcgcacgcaattttggcttgt
gtggattatataggatgtttgttcgtgtattccattgaatcaacgtctaccaagttggtg
tgtaatctgatattgcaagtcgatgcagaagacatatcacctacaagtcacagagtcatc
tggtgtccctatatcccagaggatgaatctggagattctgacgaagtttcaaaacttctt
gtattaacacggggctcaaaagctgaattatggtcaattgcaaatgtcgcagcacgaaag
ggtcctggccccatacaagctacagatcacacaataaaggaaaccggtggtatgctagag
atcagccagcacacaggagcaattatagaagctacattcagcccagacggtacagctctg
gctacagctagtttagatggggaggtaaagttctttcaggtatatatgcatggtaattca
tgcgctggccaaacgcagccacgatgtttgcaccagtggaggccacacgacggacgtccg
atatcttgtttattttttcttgacgaccacaagagctatcagcccgacgcccaattctgg
agatttgcaataacgggatgcgacaataattcagaattaaaagtatggtcttgcgaattg
tggacatgcctccaaacaataaaatttgagccaacacctaccaccggcaagatgcccgtt
ttgaaagctggcctagacctcagtgccggatacttgttactctcagacatatacaacaaa
gttttatatatactgagtctagcgaaagacagtggcgaagcactcgcatgtgtcagtacc
gtttccgagttccttctaccataccccatactgagttttggcattgtcgatgccggtcag
cgcagagtccgacccacaggagagtctctcgaagatctttgcccgtgcgaggacgatatt
gaagatcagctggtggtacgcatgtaccttgtccagccaaagtctcttcaggagtgccac
atcgcattcaggccggccacgcatgttagtggttcgtgccttatggatacactcactcac
gattccctcgattattcggaagatctaccggatatgggaacggttaatcacaatggaaat
gccgaagaagaaaatggcgaggaggatcgttccgtctctacaaccatggaagcatccgcg
aatcacaatgccggattgaatcttatgactcccgacgcttttagttctcctgctaaaaaa
gatggcaatactctcgattcgaatcctgccagtccggatttggaaaatgtactctccggt
agtccatccttggctcaagccgtacaggctttgaatgcatccgatccaccattagccacg
agtgaagttgaggaacaagcaccagcaagtggtggaagcagcccttcgagggaagtgcgg
gaaattctgtcactagcggaacctgaacccgaagaggaagtcaaaccagaatttgttctc
gacgacgacgacatttgggagcataccccaccagttttattaaaggatgtcagtgtgcat
gcaatgcaagagacggaggaatttcccgaggaagaggataatgatgaacgacgaacatta
tccaaggcaggagtggaatcgaatgtcggcctgaatactgctgacaagaattggcgcatg
acgaacgacagtcatatgctggcattgaacagaaagttggattctcttctcgagacagta
cagaatcagcgtcaggaactcagggaattgagaacagaagttacccggttgcgccagaca
acaccagtgacgacgaggatcgaatctgccctaaccagggcgtcccagcaacagaacgcc
tctctagagcaagcgatgcacagccaactgactcgacaacaggaagtcctgagttctctc
gagaatacgatcaaagagaagatcttcacgagtcttccacgaatgctggaatatggtgta
gaacctctgaggcatcaactggcacagatagacgatgtccttaaggatagtttgacagaa
ctgataaacggctcgcaattaaaagatacgcttgcactggtagcagctaattcggctaaa
acagctttggacatcgctttcaaggagtccttcacaaacgttttacttcctggtatggag
agagcttgtcaaaatatgtttaggcaggtgcaggatgcctttgccaaaggcacgcaagag
tatctgcaaaaggtggaacagctcctgataaaacaagcccagcgaaataatgaacaacag
agtgcaattctggctacatccgttcgagaagaactgcaaaacgaattgaccagaggccta
tctgcgattcaggaaggaacagctagaacggttcgtgactccatccgggagcatctcaat
caacatttcacagaactgagtggagcgcgatctcgagccactacacctggaatccctgtt
cctgccgtggccgatgcgcaagcccgtgtcctgtcccttcttcagcgtggtcaattgaat
gccgcgtttcaacaggctcttagtgctagcgacctaggactcgtagtcctagtatgcgat
cgcactgaaccttctcgtgtcttttcgtgtcccctgggtccacagggtcaaggatccaga
tgtattctacaacagcctgtgatcctttctcttgttcagcaactctccgccgacctagga
caccgtaccgaacttaagcacagatggctggaagaagcgatcctcaacctggatcctact
gatcccgtaacgcgggaacacatgggcaacgtattaatgactcttcaaaatcaattggcc
actttcgtagcagcgaacccgaatcatcgatcagccagacgtatgaagatgctggctatg
ggtgccagagcgcttctaaatcaacacccttga
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integrated database retrieval system
