Cephus cinctus (wheat stem sawfly): 107275071
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Entry
107275071 CDS
T07523
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccin03021
]
107275071
Transcription machinery [BR:
ccin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
107275071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
TOR1L1_N
HEAT
HEAT_EF3_N
HEAT_2
HEAT_EZ
ResIII
DEAD
HEAT_ECM29
RIX1
Motif
Other DBs
NCBI-GeneID:
107275071
NCBI-ProteinID:
XP_015610317
UniProt:
A0AAJ7CHZ8
LinkDB
All DBs
Position
Unknown
AA seq
1908 aa
AA seq
DB search
MTSRLDRLFILLETGTNAVTKRAAALQLGEAQRLHPHELHHLLARVSTLLKSPQWDTRVS
AAHAVQAILAQVPPWDPQPCKHASNAEKNVAQRKATNYRLSLEDFDMSRILARSTHLTGS
EGSEYDLVVSEGGEQSAPQQSEKIIAAKLGLHPQLMGIDTAELFTADDLTPVVPIPPSNK
SPDKVSVDETLHESGGLSSREMNRARRKARQSVSKQRSREPDDAQEHSSNRPKNQIQSSG
VEEPIAKKIKADEVTSPEVTWSCGPSSEPSNSVPDGTGCWPDSTIDWPLESFAETLCQDL
FSQKWEIRHGAATALRELVRLHGKGAGKSRDQTVEEMEESHRRWIVDAALRLLCVLGLDR
FGDFVSDQVVAPVRETCAQALGTLLRLMPNDDAVMGVLAVMLKLLEHDEWEARHGALLAL
KYLLAVRDDLLDEILPKAFPAAMRGLADPVDDVGAAAASALIPVASFLPNLLDSTQLEAV
ILRLWELLREQDDLAAACNSFMGLLAAVLSLPAARACLAPQPLYQVLPRLWPFLGHSSSS
VRKATLQTLQTLTGEDEEHNKDRKKRWGEGGSVVLQEALRQVFQRVLIEHVAAIQEVAER
VWENLLVHSDLELLLHAACPLVSTWLCFAMQPEHAPFNPALLTAIVAQPNTRGAKTGQSV
GNGDGQSDSGSNSNASGSAKSTSEFKVYIGGIETVAQSTRHSNVVRARCMAARMLGLLSR
YVVQPAPGVIYTPDIPSPALCYAKVLLAHLTSRSALQRTIVGLTMAHWAALEHPNPPAIP
NILRDKLLGCLNECVYYDEIAGSFTRLLHDSRDYIATLKHYKLPLPVDVDTTIGVMTLEQ
IATLAGKAIPGASIVNNSGGAPGTTGGGSNGNPVIVKLKPKLIESLEERRRALEIGAAAT
AAQQQSLHVMSMAALAGAATMLHCLPEFPQPLNPLVKPLMEAIKREEDEELQKLAAKHLA
HLVDLCADRQPSPNPKIATNLCTFLCSDVEFTPRVQGTDSNPFNGILTLNNRQRYVERVA
YNRGAGSGIGGGRGPGRPPATDIPLEELLACEEPEAKACRTRRRGATLALTAIATLLGAQ
LPTRLPHLWELLFPTVLRKSGADKDDTSREDCQDEANQLVFGLQVLEIVTPSLHGTLLPP
ALECLPRLCALLAHPYKAVRHMSARCIAVLATLETEQTMAHVVRSVIPLLETSSAKDSGS
STIAAPNEVDARRQGAAEALTCLVESLGVKVVPYAVLFMVPLLGRMSDQNQAVRLACSST
FATLVQLLPLDPGGIGDPPHLVEEKTQERRFLEQLLNPSSIPDTELTVPVAAELRAYQRQ
GLNWLDFLNRYQLHGVLCDDMGLGKTLQTLCILALDHHRNPQAPASLVVCPPTLTGHWVY
EAKKFLQKRDLSVLHYFGNPLEREKFRSRVAQHRLVVTSYDIIRKDVEFFEAVQWNYCVL
DEGHVIKNGKTKSAKAVKRLHAHHRLILSGTPVQNDVLELWSLFDFLMPGFLSSEKQFAA
KYSRPILACREPKAGPKEQEAGALAMEALHRQVLPFLLRRNKEDVLQDLPPKITQDYYCD
LSPLQRRLYEDFRTRHSAALQPLYSSSTTSTPSSTSNPRGGHVFEALRYIRNVCNHPKLV
LSPRHPQYQQVCALLKQQQSTLENIEHGAKLPALKQLLLDCGIGQPQPQQQLNKNLTSAV
VGTDGQQQQQQLVSQHRALIFCQLKAMLDIVENDLLRTHLPTVTYLRLDGSIPSTQRHSV
VARFNADPSIDVLLLTTQVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVV
NVYRLITRSTVEEKIMGLQKFKLLTANTVISTENASLETMGTEQLFDLFSLDNGKKTECQ
EDTGSQKVVGVSGVSRSVLEILPELWEQQQYDDEYDLDSFLLTLKADA
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaaggctagacagactcttcatattactggagacagggacaaatgcagtaaca
aaaagggctgctgcgctgcaattgggagaagcacagaggctacacccacatgaattgcat
cacttattagctagagtctcgacattactaaagtcaccacaatgggataccagggtttct
gctgcacatgctgtccaagcgatactagcgcaagtcccaccttgggatccacagccatgc
aagcatgcatctaacgcagagaaaaacgtagcacagcgcaaagcaactaattacagattg
agtttggaagatttcgatatgagtcgcatactcgctcgtagtacacatctcactggttca
gaaggcagtgaatatgatctagtagtttcagagggtggtgagcaatctgcaccccaacag
tcggaaaagattattgcggccaaactcggtttacatccccagttaatggggattgatact
gctgaattatttactgcagatgacttgactcccgtcgtaccaataccgcctagtaacaaa
tcaccagataaagtgtccgtggatgagactctccatgaatctggtggattgagtagccga
gaaatgaatagagcacgacgcaaagcacgacagtccgtatctaaacagagatctcgggag
ccagatgatgctcaggaacacagttcaaatcgaccaaaaaatcaaatacaaagtagcggt
gttgaagaaccaattgcgaaaaaaataaaggcggacgaggtcacctcaccagaagttacg
tggagttgcggtccatcaagtgaacccagtaatagtgttccagacgggacagggtgttgg
ccggattctacaatcgactggccgttggagtcctttgctgagactctttgtcaggatctc
ttcagtcaaaagtgggaaatacgtcatggtgccgcgacagcactacgggaactagtacgc
ctgcacgggaaaggagctggaaaatcaagggatcaaaccgtagaagaaatggaggaaagt
caccggcggtggatagttgatgctgcactgcgtttactatgtgttttgggacttgataga
tttggagatttcgtatcggatcaagtagtagcaccagtgcgcgagacttgtgcacaggcc
ttgggtactctgttgcgactgatgccgaacgacgatgctgttatgggagtgctggccgta
atgctaaaacttctggaacatgacgaatgggaagcaagacatggagctttgctggccctg
aagtatctactggctgtgcgcgatgatcttctcgacgaaatattaccaaaagcatttccc
gcggcaatgcgaggactcgctgatccggtagacgatgtcggcgctgcggcagcaagcgct
ctcataccggttgcctcttttttacccaatcttcttgactccacccaactcgaggctgtc
atattacgtttgtgggagctactgcgtgaacaagatgatctagctgctgcttgtaatagt
ttcatgggacttttagctgctgtgctgtcgctacctgcagcacgcgcctgcttggcaccg
caacctctgtatcaggtattaccacgactgtggccattcctcggtcattcaagctcaagt
gtgcgaaaggccacattacagactctgcaaaccctaacgggagaggatgaagagcataac
aaggacagaaaaaaacgttggggcgaaggaggcagcgttgttctgcaagaagccctgcga
caagtgtttcagagagtgttgatagagcatgtcgcggctattcaagaagttgctgaacgt
gtctgggagaatctgcttgtgcatagcgatttagaattacttctacacgcagcctgtcct
ttagtgagcacctggttgtgctttgctatgcaaccagaacacgcgccgtttaatcctgcg
ctattgactgccatagtggcgcagcccaacaccagaggagcaaaaactggtcagtctgtc
ggaaacggtgatggacaatccgattctggaagtaatagcaatgccagcgggagcgcaaag
tcaacttctgaatttaaagtctatattggtggaatcgagactgtagctcaaagcactaga
cattctaacgtggtgcgagcacgctgtatggctgccagaatgctcggcttgctttcacgc
tacgttgtacaaccagcacctggtgtaatttacacacctgatatacctagtcccgctctg
tgttatgctaaagtgcttctggcacatttaacatcgagatcggcccttcagcgcactatt
gttggtcttactatggctcactgggctgctcttgagcatcctaatccacctgcaatacca
aatattctcagggataaactgttaggttgcctaaacgaatgtgtgtattacgacgaaata
gcaggatcttttactagattattacacgatagccgagattacatcgctacgttgaagcat
tacaaattgccccttcccgtggatgtcgatacaaccatcggagttatgacacttgagcag
atagctactctggccgggaaggcaattcctggtgcgtcgattgttaataattccggcgga
gctcctggaacgactggaggcggtagtaacggtaacccagtaattgtcaagttaaaacca
aagctgatagaaagtctcgaggaacggagacgtgccctagaaattggggcagctgcaacg
gcggcgcaacagcaaagcttacatgtgatgtcaatggcggcactggccggtgccgctact
atgctacactgcctgccagaatttccacagccattgaatcctctggttaaaccattaatg
gaagccatcaagcgcgaggaagacgaagagttgcagaaattggctgcaaaacatttagct
catcttgtagatctctgtgcagatcgtcaaccctcccctaatccgaagattgcaacaaat
ttatgcacatttttgtgctcggacgtagagttcacgccacgtgtacagggaacagattcc
aatcctttcaacggtatccttactctaaataatcgtcaacgttacgtcgaaagagtggct
tacaatcgtggagcaggaagtggcatcggtggtggtagaggtccaggaagacctccagct
accgatattcctctggaagaattattagcctgcgaggaaccggaggctaaagcttgcaga
acacgtcgtcgaggagcaactttggctcttacagctatagctactttgttgggagcccag
ttaccgacacgtctgccgcatctctgggaattactatttccaacggtattgcgtaaaagt
ggcgcggataaggatgatacttctcgcgaggactgtcaggacgaagcaaatcagctagtc
tttggattgcaagtcttggaaatcgtcacacctagtctacatggtacccttctgcctcct
gcactggagtgtttgcccaggctctgtgcgctactcgctcatccttacaaggctgttaga
cacatgtctgcaagatgcattgcagtgctggccacccttgaaacagagcagactatggca
cacgtagtgcgcagtgtcattccccttctggagaccagcagtgctaaagattcaggcagt
tccacgatagcagcgcctaacgaagtcgatgctagacgacagggtgctgcggaggccttg
acgtgtcttgtggaaagtctaggtgtcaaagtcgtaccgtatgccgttttgttcatggtg
ccgttgttgggacggatgagtgatcagaatcaagcggtgagactcgcgtgcagttccaca
tttgcaactctcgtgcaactgctgccacttgaccctggtgggattggagatcctccacat
cttgttgaggagaagacacaggagagacgcttcctggaacaactacttaatccaagtagc
attcctgacacggaactcactgttcctgtggctgccgaattgcgggcctatcaacgtcag
ggtttaaactggctggactttctcaatcggtatcaactccacggtgttctctgtgatgat
atgggattgggaaaaactctgcaaactctctgtatcctcgctctggatcatcatcgaaat
ccgcaagcgccagcaagcttggtagtctgtccacctactctgaccggtcactgggtttac
gaagcaaagaaattcctgcagaagcgcgatctctcggtgcttcactatttcggtaatccg
ttggaacgcgaaaaatttcgatcaagagtagcgcaacatagactcgtagttaccagctac
gacattattcgcaaggatgtagaattcttcgaagctgtacaatggaattattgcgtcctg
gatgagggccacgttattaagaatggaaagacaaagagcgctaaagctgtcaaaagactt
cacgcgcaccataggctcatcctttcgggaacacctgtgcagaatgacgttcttgaactt
tggtccttattcgatttcctcatgccaggatttcttagtagtgagaaacagtttgcagca
aaatactcacgacccatattagcctgcagagaacccaaagcaggacccaaggagcaggaa
gccggagcacttgcgatggaagctctacacagacaggtattacctttcttactgagacgc
aacaaggaagatgtattacaagatctaccaccgaaaattactcaagattattactgcgac
ctgtcaccactgcagcgtcgtctgtacgaagattttcgtacgcgacattcggctgctctt
cagccactatattcttcgtccactacatccacgccatcctctacgagtaatccacgagga
ggtcacgtctttgaagcattgcgatacatacgtaacgtatgcaatcatcctaagctggta
ctcagtccgcgtcatccccaatatcagcaggtttgtgctctcctgaagcagcagcaaagc
acattggagaatatagagcacggtgcaaagctgcccgctcttaagcagcttttactggac
tgtggtatcggccaaccccagccgcaacaacagttaaacaaaaatttgacttctgccgtt
gttgggaccgatggccaacagcagcagcaacaactagtgagccagcatcgtgctttgata
ttctgtcagttaaaggcgatgttggacatcgtggaaaacgatctgctgcgtactcatcta
ccaacagtgacttaccttcgactagacggaagcataccgtctacacagagacactcggtc
gttgcacgctttaacgccgatccatctatagacgttttgctgctgaccactcaggtcggt
ggtttgggtttgaatctaacaggagccgatactgtcatattcgttgagcatgactggaat
ccgatgaaggatctacaggcaatggacagagctcatcgtatcggccagaagaaggtggtg
aatgtctatcgccttataacaagatctaccgtcgaggagaagattatgggattgcaaaag
ttcaaacttctcactgcaaataccgtcatttctactgagaatgcttctttggagactatg
ggcactgagcagctattcgacctgttctccttggacaatggaaaaaaaacagagtgtcaa
gaagacactggttcacaaaaagtcgtcggggtttccggtgtaagtcgatccgtacttgaa
atcctgccagaactctgggagcagcagcaatatgacgatgagtacgacttagattcgttt
ttgttgacgttgaaggctgatgcttaa
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integrated database retrieval system
