Cephus cinctus (wheat stem sawfly): 107275204
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Entry
107275204 CDS
T07523
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107275204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccin03400
]
107275204
DNA repair and recombination proteins [BR:
ccin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107275204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
107275204
NCBI-ProteinID:
XP_015610569
UniProt:
A0AAJ7FVM4
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MAVQPNQQFSMDPPTQQSFVRFFKSLPEKPSSTVRFFNRSDYYTLHGSDALFAAQEVFKT
TSVCKMIGAPPHKTEGVILNKGHFETFIRDLLLVKQYRIEVYVNQGSAKNQDWILEYKGS
PGNLLQFEEILFGNNEVAVGTSVIAVKLGSEGKTKIVGVSCVDVIGTTISVCEFTTDESF
SDLEALVVTLAPKECLLIQGEGSYEFKTIKQIMERSNVMITLRKKSDFSTDSLMQDLNTL
VKFKKGQQQNAQSLPETNLNVAMAATASIIKYLELTSDEGNINQFTLQQLEQSRYVRLDT
AAIRALNVEPRNDVPSGPSGNFNSSILGLLDKCRTSQGHRLIAQWVRQPLRDLSLIKERL
DIVEALMKDNELRSALNEDHLRRVPDLQQLAKKLSRKKANLQDCYKIYLCVAHLPTLLEQ
LSAATGVAAFTAMLIEPLKELIEDMDKFQQMVEQTIDLEAAEKGDFLVRPDFDDELKELN
VNMEAAEKELGGQLGKVADDLSLEAGKTLKLESNQQFGYYFRVTLKEEKILRNKKNYTVL
DSNKSGVRFRNSKLTDINEDYLAARDKYTVQQKSVVDEIIGIAAGYCSPIKSIGSVVACL
DVLTAFATAAANAQKAYVRPEMLPSETGELKLEQARHPCLELQEGVDYIANDIDFKRDES
TFYIITGPNMGGKSTYIRSVGVVALMAHIGSFVPCDKATISLLDCILARVGADDSQIKGL
STFMTEMVETAAILKAATCNSLVIIDELGRGTSTYEGCGIAWSIAEHLAKDVKAYCLFAT
HFHEITKLAEDVPTVKNKHVTALVGDNKLTLLYKVKPGICDQSFGIHVARMANFPEEVIE
FAKRKQSELEDCQGAVFEGSENPEKKRKIIKEGEDLIAQFANKCKTLDQSLSDAELKGKI
ATFKEEILSHKNPYIKALLSSP
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcaaccgaatcaacaatttagcatggatccaccaactcaacagagttttgtt
agattttttaaaagtcttccagaaaaaccgagcagtaccgtacgattctttaatagatca
gattattatacactgcacggaagcgatgcactctttgcggcacaagaagttttcaaaacg
acatccgtttgcaagatgattggagctccgccgcataagacagaaggtgttattctaaat
aaaggacattttgagacattcatacgtgatttattactcgttaagcaatacagaattgag
gtatacgtgaatcaaggatcagcaaaaaaccaagactggatcttggaatacaaaggttca
cctggaaatctcctgcagttcgaagaaattttatttggcaataatgaggttgcagttggg
acatcagttatcgctgttaaattgggatccgaaggaaaaacgaaaatcgttggtgttagt
tgtgtcgacgtcattggaacaaccatttctgtttgcgaatttaccacagatgaatcattc
tcggacttagaggctcttgtggttacactcgctccaaaagaatgcctgttaattcaaggt
gaaggaagctatgaatttaaaaccattaaacagattatggaaagaagcaacgtaatgatc
acactcaggaaaaaaagcgatttttctacggattcgttaatgcaagatctaaacactctc
gttaaatttaaaaagggtcagcaacagaatgctcagtcattaccagagacaaatctaaat
gtagcaatggcagcgactgcatctattatcaaatatcttgaattgacatctgatgaagga
aatataaatcagttcactctacaacaattagaacagtcgcgttacgtgcgattggacact
gcagctataagggcgctcaacgttgagccacgtaatgatgttccctctggtccaagtgga
aatttcaattccagcattttgggtttgcttgataaatgtagaacatcacaaggccataga
ctgattgctcagtgggtcagacagccactcagagatttatctcttataaaggaaagactt
gacattgtcgaagctctaatgaaagataatgaattgaggtcagccctcaacgaagatcac
ttgcgacgcgtaccagatttacagcaattggcaaaaaaattatccagaaaaaaagctaac
ttgcaggattgctataagatttacctatgtgtagcacatttgccaacattacttgaacaa
ctctctgcagcaacgggagttgcagcttttacggcaatgttaattgaacccttgaaagag
ttaattgaagatatggataagtttcaacaaatggttgaacagactatagacttggaggca
gcagaaaagggtgattttttagtacgacctgatttcgatgatgagttaaaagaactaaat
gttaatatggaagcggcagaaaaggaattggggggtcagttgggaaaagttgctgatgac
ctctctttggaagctggaaaaactctaaagctagaatcaaatcaacaatttggttactat
tttcgcgtaactttgaaggaggaaaagattctgagaaataagaaaaactacaccgtgtta
gattcaaataagagtggtgtgagatttcgaaacagtaagttgacggatatcaatgaagat
tatcttgctgccagagacaaatatacggtgcaacaaaaatcagttgtcgatgaaattatt
ggcattgcagctggttactgcagtccaattaaatcaatcggttctgttgtcgcgtgcttg
gatgtacttacggcttttgccacggcagcagctaatgctcaaaaagcttacgtgcgacct
gaaatgctcccaagcgaaacgggtgaattgaaactcgagcaagctcgacatccgtgctta
gaattacaggaaggtgttgattacattgctaatgatattgactttaagcgagatgaatcc
acattctatattataactggacccaatatgggcggtaaaagtacctatatcaggtctgtc
ggcgttgtagctttaatggcgcatattggcagttttgtaccttgcgataaagccacaata
tctctactcgattgtattttggcaagagttggtgcagacgattctcaaataaagggtctc
tcaacgtttatgacagaaatggtagaaacagctgccattctgaaggcggctacctgtaat
tctctggttataattgatgaactcggtagaggaacttccacatacgagggttgtggaatc
gcttggtctattgcagagcatttggcaaaagatgtcaaagcatactgcctatttgcaaca
cactttcacgagattacaaaattggctgaagatgtacctactgtaaaaaataaacacgta
actgctcttgttggagataataagcttacgttattgtacaaagtcaaaccaggaatctgt
gaccaaagttttggaattcatgtagcaagaatggcaaactttccagaggaggtcatagag
tttgccaaaagaaaacagtccgaactagaggactgtcaaggagctgtttttgaaggatct
gaaaatccagaaaagaaacgaaaaatcattaaagagggagaggatcttatagcacagttt
gcaaataaatgtaaaactctggatcaatcgttatccgatgctgaattgaagggtaaaatc
gctacattcaaagaagaaatactttcacacaaaaatccgtatatcaaagctctcttgtct
agcccatag
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