Curtobacterium citreum: QPK07_03165
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Entry
QPK07_03165 CDS
T09163
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ccit
Curtobacterium citreum
Pathway
ccit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QPK07_03165 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccit03019
]
QPK07_03165 (recQ)
03400 DNA repair and recombination proteins [BR:
ccit03400
]
QPK07_03165 (recQ)
Enzymes [BR:
ccit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QPK07_03165 (recQ)
Messenger RNA biogenesis [BR:
ccit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QPK07_03165 (recQ)
DNA repair and recombination proteins [BR:
ccit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QPK07_03165 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HHH
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
WIJ45980
LinkDB
All DBs
Position
644364..646181
Genome browser
AA seq
605 aa
AA seq
DB search
MSSTPALDVLHRVWGYDAFRGEQAAIIDQVVGGGDALVLMPTGGGKSLCYQVPALVRDGI
GVVVSPLIALMQDQVDALAANGVQAAFLNSTQGPDERARVERAVVSGQVDMLYLAPERLR
LESTRSLLDRARIALFAIDEAHCVAQWGHDFRPDYLELSVLHERWPTVPRIALTATATPQ
THREISARLGLDDAAHFVADFDRPNIQYRIEPKTGALQQLLTFIRTEHSGDAGIVYCLSR
NSVERTAAALAEQGIPALPYHAGLDAKVRERNQSTFLREDGVVMVATIAFGMGIDKPDVR
FVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLNDVVQQRRMIDQSEGDAAHRRQLS
AHLDAMLALCETIECRRVRLLAYFGQESTPCGNCDTCIAPPEPWDGTVPAQKLLSTVVRL
DRERGQRYGVAHLVDILVGKQSPRVQELRHDQLATFGIGSDLSEGEWRAVARQLLAQGYA
AVSGDGFGTVVLSPTSADVLSGRVQVLMRRDPVKSTRSSRTRRTVVSDMPREAVGLFEAL
RAWRAGQAREQGVPAYVVFNDATLRGIAAVKPADQDELAEISGVGTAKLERYGRAVLEVV
AAHAD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagttccacgcccgcgctggacgtcctgcaccgggtctgggggtacgacgccttccgg
ggcgagcaggccgccatcatcgaccaggtggtgggcggcggcgacgcgctcgtcctgatg
ccgaccggcggcggcaagtcgctctgctaccaggtgcccgcgctcgtgcgcgacgggatc
ggggtcgtcgtctcgccgctcatcgccctcatgcaggaccaggtcgacgccctcgcggcg
aacggcgtgcaggcggcgttcctcaactcgacgcagggacccgacgagcgcgcccgggtc
gagcgcgcggtggtgtccgggcaggtcgacatgctctacctcgcgcccgagcggctgcgg
ctcgagtccacccgctccctgctcgaccgcgcgcggatcgcactgttcgcgatcgacgag
gcgcactgcgtcgcccagtgggggcacgacttccggccggactacctcgagctgagcgtc
ctgcacgagcgctggccgacggtgccgcggatcgccctgaccgccaccgccaccccgcag
acccaccgcgagatctccgcccgcctcggcctcgacgacgccgcgcacttcgtggccgac
ttcgaccgaccgaacatccagtaccggatcgagccgaagaccggggcgctccagcagctc
ctgaccttcatccgcaccgagcacagcggcgacgcgggcatcgtgtactgcctgtcccgg
aactcggtcgagcgcaccgccgcggccctcgccgagcagggcatcccggcgctgccgtac
cacgcgggcctcgacgcgaaggtccgcgagcgcaaccagtcgacgttcctgcgcgaggac
ggcgtcgtcatggtcgcgacgatcgcgttcggcatgggcatcgacaagcccgacgtgcgg
ttcgtggcgcacctggacctgccgaagtcggtcgagggctactaccaggagaccggtcgt
gccgggcgggacgggctgccctcgaccgcgtggctcgcgtacgggctgaacgacgtcgtg
cagcagcggcggatgatcgaccagtccgagggcgatgctgcacaccgccggcagctcagc
gcgcacctcgacgcgatgctcgccctgtgcgagacgatcgagtgccgccgggtgcggctg
ctcgcgtacttcgggcaggagtcgacgccgtgcggcaactgcgacacgtgcatcgcaccg
ccggagccctgggacggcaccgtccccgcgcagaagctgctgtcgacggtcgtccgtctc
gaccgggagcgcgggcagcggtacggcgtggcgcacctcgtcgacatcctcgtcggcaag
cagtcaccgcgcgtgcaggagctccggcacgaccagctcgccacgttcggcatcggcagc
gacctgagcgagggggagtggcgcgccgtcgcccggcagctcctggcgcagggctacgcc
gcggtctccggtgacgggttcggcaccgtggtgctcagcccgaccagtgcggacgtcctg
agcggccgcgtgcaggtcctgatgcgccgcgaccccgtgaagtccacgcggtcgtcccgc
acccgccgcacggtcgtgtcggacatgccgcgggaggccgtcggactgttcgaggccctg
cgtgcctggcgcgccgggcaggcccgcgaacagggagtccccgcctacgtggtgttcaac
gacgcgacgctccgcggcatcgcggcggtgaagcccgccgaccaggacgagctcgccgag
atatccggggtcggcacggcgaagctcgagcggtacggtcgtgcggtgctcgaggtggtc
gcggcgcacgcggactga
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