Curtobacterium citreum: QPK07_04555
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Entry
QPK07_04555 CDS
T09163
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccit
Curtobacterium citreum
Pathway
ccit03420
Nucleotide excision repair
ccit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QPK07_04555
03430 Mismatch repair
QPK07_04555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccit03400
]
QPK07_04555
Enzymes [BR:
ccit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QPK07_04555
DNA repair and recombination proteins [BR:
ccit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QPK07_04555
MMR (mismatch excision repair)
Other MMR factors
QPK07_04555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
WIJ46245
LinkDB
All DBs
Position
933178..936441
Genome browser
AA seq
1087 aa
AA seq
DB search
MTTDTSGTTDTSDAGALPTVGATPTPQHDADAIADALGRPRPTAQQRAVIESPLAPALVV
AGAGSGKTETMASRVVWLLANGFVRPAEILGLTFTRKAAGELSVRINDRIRALEDVGLLD
AGDAFEAPTVSTYNAFANAVFRENALLVGRDGESQVLTEPSAWQLARRVVVAARDDRLAG
LDRDVDTVTAAVVALAGAVSEHLVDPDRLRRFAVDFGALLELPGNNRGNPYKAVTDAVRA
VGALEPLVELVEEFRRQKVDRGFVEFSDQIALALAAAESAPRVVEDLRTRFRVVLLDEYQ
DTSVVQTRFLARLFRGHPVMAVGDPHQSIYGFRGASAANLARFPRDFGDGDTVPVTFALS
TSWRNPVDVLAGANAVVGPLSDASEVAVERLAPRPGADAGTVDVAFPETLPEEADAVARW
FAARRAADPAGSMALLLRSRKDLSAFTGALADHRVPFHVLGTGGLLQRPEIVDLVACLRV
LHDPAAGNDLIRLLVGARWRVGAADVKELHGLARWLFSRDHTHQRLDDDVTAAFRASVAV
GEHGSIVDALDFVATAPDEHGALAAISPAGRARMRALGQQLAALRARAAGDLVDFVTLVV
QEMQLDVEVAAHEQGSGAFLDAFVDELAGFVTTDDRADLGAFLGWIDAAARRDDMGPRSE
EPEAGTVQILTIHGSKGLEWDAVAVPRLVEGALPARPQEGSSGWLGFGRLPYEFRGDAEE
LPRLDWRGRASQKEVVDAIDAYREQVAARNEDEERRLTYVALTRARHDLLVSGSFWAGGV
RPTEPSRYLRDLVEAGVVDADAVPDGTVYEEDPLGTDGAVQSWPHAPFGSRGTSVVAAAE
RVRNANPGAAGRFAADIDLLLAERQAQRSARHTVAIPHRVPASGFKDYLAQPDRVAERLR
RPMPERPYRATRLGTLFHQWVEQRVARGGSLETLDAWDGELDLDPDELGAADADAAVTDD
DARRLATFQETFSRSRWADRVPVEVEREIHIPFLGHSVVCKLDAVYEIDGRAEVVDWKTG
KAPSGADDLAARQLQLALYRVAYAEFTGRPVDEVDAVFYFVADDLEVRPTDLLDRDGLER
AWRAALG
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacggacacgagcggaacgacggacacgagcgacgccggggcgctccccaccgtc
ggcgcgaccccgacgccccagcacgacgcggacgccatcgccgacgccctcggacgcccc
cgaccgaccgcccagcagcgcgccgtcatcgagtccccgctcgcgccggcgctcgtcgtg
gccggcgccggcagcggcaagaccgagacgatggcgtcgcgcgtcgtctggctcctcgcg
aacggcttcgtccgaccggccgagatcctcggactgaccttcacccgcaaggccgccgga
gagctctcggtccggatcaacgaccgcatccgtgcactcgaggacgtcggactgctggac
gccggcgacgcgttcgaggcgccgaccgtgtcgacctacaacgccttcgcgaacgcggtg
ttccgcgagaacgccctgctcgtggggcgggacggcgagtcccaggtgctcacggagccg
tccgcctggcagctcgcgcgccgggtcgtcgtggccgcccgggacgaccggctggccgga
ctcgaccgcgacgtcgacaccgtcacggccgccgtcgtcgccctcgccggtgccgtgtcc
gagcacctggtcgacccggaccggctccgtcgcttcgccgtcgacttcggcgccctgctc
gagctgccgggcaacaaccgcggcaacccgtacaaggcggtcaccgacgcggtgcgtgcc
gtcggggccctcgagccactcgtcgagctggtcgaggagttccggcggcagaaggtcgac
cgcggcttcgtcgagttctccgaccagatcgcgctcgccctcgctgccgccgagtccgcc
ccccgcgtggtcgaggacctgcgcacccggttccgcgtcgtcctgctcgacgagtaccag
gacacctcggtggtgcagacgcgcttcctcgcccggctgttccggggccatccggtgatg
gcggtcggcgacccgcaccagtcgatctacggcttccgcggtgcgagcgcggcgaacctc
gcgcgcttcccgcgggacttcggcgacggtgacaccgtccccgtcacgttcgcgctgtcg
acgagctggcggaacccggtggacgtgctggccggggcgaacgccgtcgtcgggccgctg
tccgacgcgtccgaggtcgccgtcgagcgcctcgccccgcgacccggtgcggacgcgggc
accgtcgacgtggccttcccggagaccctgccggaggaagccgacgccgtcgcccggtgg
ttcgccgcacgccgcgcggccgaccccgccggctcgatggcgctcctcctgcgctcacgg
aaggacctgtccgcgttcaccggcgccctggccgaccaccgcgtcccgttccacgtgctc
ggcaccggcggactcctccaacggccggagatcgtcgacctggtcgcctgcctgcgggtg
ctgcacgacccggccgccgggaacgacctcatccgcctgctcgtcggcgcccggtggcgt
gtcggtgccgcggacgtcaaggagctgcacggtctcgcgcgctggctgttcagccgcgac
cacacccaccagcgactcgacgacgacgtgacggcggccttccgggcgtcggtcgcggtc
ggcgagcacggatcgatcgtcgacgccctggacttcgtcgccaccgccccggacgagcac
ggcgcgctcgccgcgatcagtccggcgggccgggcccggatgcgcgcgctcgggcagcag
ctcgccgcactgcgcgcccgggccgcaggcgacctggtcgacttcgtcacgctcgtcgtg
caggagatgcagctcgacgtcgaggtcgcggcgcacgagcaggggagcggcgccttcctg
gacgccttcgtcgacgagctcgccggtttcgtgacgaccgacgaccgcgcggacctcggg
gcgttcctcgggtggatcgacgcggccgcccggcgcgacgacatggggccgcggtccgag
gagcccgaggccggcacggtccagatcctgacgatccacggctcgaagggcctggagtgg
gacgcggtcgccgtgccccggctcgtcgagggcgcgctgccggcccggccgcaggaggga
tcgtccggctggctcggcttcggacgcctgccgtacgagttccgcggcgacgccgaggaa
ctcccgcggctcgactggcggggacgcgcgtcgcagaaggaggtcgtcgacgcgatcgac
gcctaccgcgagcaggtcgctgcacgcaacgaggacgaggagcgccggctcacctacgtc
gcactcacgcgggctcggcacgacctgctcgtgtcgggctcgttctgggccggcggtgtc
cggcccacggagccgagtcggtacctgcgcgacctggtcgaggccggggtcgtcgacgcc
gacgcggtcccggacggcacggtgtacgaggaggacccgctcggtaccgacggcgcggtc
cagtcctggccgcacgccccgttcggttcccgggggacgagcgtcgtcgcggcggccgaa
cgggtccggaacgccaacccgggagcggccggccgcttcgccgcggacatcgacctgctg
ctggctgaacgccaggcccagcggtccgcccggcacacggtcgcgatcccgcaccgcgtg
ccggcctcgggcttcaaggactacctcgcgcagccggaccgcgtcgcggagcggctgcga
cgaccgatgccggagcggccctaccgggcgacccgcctggggacgctcttccaccagtgg
gtggagcagcgcgtggcccgcggcggatcactcgagacgctcgacgcctgggacggcgag
ctcgacctcgatcccgacgagctcggagcggccgacgcggacgcggcggtgaccgacgac
gacgcccgccgactcgccaccttccaggagacgttctcccggtcccgctgggcggaccgc
gtgcccgtcgaggtcgagcgcgagatccacatcccgttcctcgggcacagcgtcgtctgc
aagctcgacgcggtctacgagatcgacgggcgcgccgaggtcgtcgactggaagacgggg
aaggcgccgtccggcgccgacgacctcgcggcgcggcagctgcagctcgcgctctaccgt
gtcgcctacgccgagttcacggggcggccggtcgacgaggtcgacgcggtcttctacttc
gtcgcggacgacctcgaggtgcggccgaccgacctgctggaccgggacgggctcgagcgc
gcctggcgcgcggcgctcggctga
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