Curtobacterium citreum: QPK07_06700
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Entry
QPK07_06700 CDS
T09163
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ccit
Curtobacterium citreum
Pathway
ccit03030
DNA replication
ccit03430
Mismatch repair
ccit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QPK07_06700 (dnaE)
03430 Mismatch repair
QPK07_06700 (dnaE)
03440 Homologous recombination
QPK07_06700 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccit03032
]
QPK07_06700 (dnaE)
03400 DNA repair and recombination proteins [BR:
ccit03400
]
QPK07_06700 (dnaE)
Enzymes [BR:
ccit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QPK07_06700 (dnaE)
DNA replication proteins [BR:
ccit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QPK07_06700 (dnaE)
DNA repair and recombination proteins [BR:
ccit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QPK07_06700 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WIJ46647
LinkDB
All DBs
Position
1404180..1407713
Genome browser
AA seq
1177 aa
AA seq
DB search
MSDSDSFVHLHVHSEYSMLDGAARLTDLVAETAAQGMPAVAVTDHGNMFGAFEFWKAAKA
GGVKPIIGTEAYITPRTHRSDKTRVRWGDGGGDDVSGSGAYTHMTMFAENTTGMHNLFRL
SSRASIEGYYFKPRMDIELLDQHHEGIIATTGCPSGEIQTRLRLGQYDEALKAAADYRDI
FGKDNYFAEIMDHGLEIERRVIEDVVRISKDLGIPLVGTNDLHYTHAHDAKSHAALLCVQ
SGSTLNDPNRFKFDADEFYLKTPQQMRHVFRDHPEACDNTLLIAERCEVEFDTAANYMPK
FPVPEGETEHSWFEKEVAKGLEYRYPDGITKEVQERADYEVGIINQMGFPGYFLVVADFI
NWSKNNGIRVGPGRGSGAGSMVAYAMRITDLDPIRHGLIFERFLNPDRVSMPDFDVDFDD
RRRGEAIKYVTEKYGSERVAQIVTYGTIKAKQALKDSSRVLGFPFGMGEKLTKAMPPPVM
GKDIPLTGIFDKDHPRYKEAVDVRTVVETDPEAKTVFDTALGLEGLKRQWGVHAAGVIMS
SEPLIDIIPVMKREQDGQIVTQFDYPAAESLGLIKMDFLGLRNLTIISDALDNIKSNRGV
DLDLETMGLEDEAAYQLLQRGDTLGVFQLDGGPMRGLLRLMKPDNFEDISALIALYRPGP
MGANSHTNYALRKNGEQPITPIHPELEEPLQDIIGTTYGLIIYQEQVMAIAQKVAGFSLG
QADILRRAMGKKKKSELDKQYAGFEKGMQDNGYSAAAIKTLWDILLPFSDYAFNKAHSAA
YGVVSFWTAYLKAHYPAEYMAALLTSVGDARDKLALYLNECRRMGIKVMPPDVNESIGFF
AAVGDDIRFGMGAIRNVGFNVVDDIVQARTEKGAFESFHDFLRKIPISSANKRTVESLIK
AGAFDEFGDSRRALVEIHEGAVESAVKVKRDEAHGNVGFDFDSLFAEVAEEQPSSAPVSQ
VPERPEWAKRDKLAFERDMLGLYVSDHPLAGLEIELAKHQSITIADLIAADDSVEGETVT
VAGLLTSVQHRVAKSSGNPYGIVQIEDFGGEIGVMFLGKTYAEFGPSLVADSIVVLRGRV
NVRDDGKALHAVSMFQPNVGDAMGSGPLTLSLPERQATTTTVTELAAVLGRHQGETEVRL
RLLKEDVARTFELPFPVNLTPDLFGELKSLLGPRCLV
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggattccgactccttcgtccacctgcacgtgcacagcgagtactcgatgctcgac
ggtgcagcgcggttgaccgacctggtcgccgagaccgccgcgcagggcatgcccgcggtt
gcggtgaccgaccacggcaacatgttcggggcgttcgagttctggaaggccgcgaaggcc
ggcggcgtcaagccgatcatcgggaccgaggcctacatcacgccgcggacgcaccgctcg
gacaagacccgtgtccgctggggcgacggtggcggtgacgacgtgtcgggttcgggcgcg
tacacgcacatgacgatgttcgccgagaacacgacgggcatgcacaacctgttccgtctg
tcgtcgcgggcctcgatcgagggctactacttcaagccccgcatggacatcgagctgctc
gaccagcaccacgaggggatcatcgcgacgacgggctgcccctccggcgagatccagacg
cgcctgcggctcggccagtacgacgaggcgctcaaggccgcggccgactaccgcgacatc
ttcggcaaggacaactacttcgccgagatcatggaccacgggctcgagatcgagcgccgg
gtcatcgaggacgtcgtccggatctcgaaggacctcggcatcccgctcgtcggcacgaac
gacctgcactacacgcacgcgcacgacgccaagtcgcacgcggctctgctctgcgtgcag
tccggctcgacgctgaacgacccgaaccgcttcaagttcgacgccgacgagttctacctg
aagaccccgcagcagatgcgccacgtcttccgcgaccaccccgaggcctgcgacaacacg
ctgctcatcgccgagcggtgcgaggtcgagttcgacaccgcggcgaactacatgccgaag
ttccccgtccccgagggcgagaccgagcactcgtggttcgagaaggaagtggcgaagggg
ctggagtaccgctaccccgatggcatcacgaaagaggtccaggagcgcgccgactacgag
gtcgggatcatcaaccagatgggcttcccgggctacttcctggtcgtcgccgacttcatc
aactggtcgaagaacaacggcatccgcgtcggtcccggtcgtggttcgggtgccggctcg
atggtggcgtacgcgatgcgcatcaccgacctcgacccgatccggcacggcctgatcttc
gagcggttcctcaacccggaccgcgtctcgatgcccgacttcgacgtcgacttcgacgac
cggcgccgcggtgaggcgatcaagtacgtcaccgagaagtacgggtcggagcgcgtcgcg
cagatcgtcacgtacggcacgatcaaggcgaagcaggcgctgaaggactcgtcgcgcgtc
ctcggcttcccgttcggcatgggcgagaagctcaccaaggcgatgccgccgcccgtgatg
ggcaaggacatcccgctcaccgggatcttcgacaaggaccacccgcgttacaaggaggcg
gtggacgtccggacggtcgtcgagaccgaccccgaggcgaagaccgtgttcgacaccgcg
ctcgggctcgagggcctgaagcggcagtggggcgtgcacgccgccggtgtgatcatgtcg
agcgagccgctcatcgacatcatcccggtgatgaagcgcgagcaggacggccagatcgtc
acgcagttcgactatccggcagcagagtcgctcggcctgatcaagatggacttcctgggc
ctccggaacctcacgatcatcagtgatgccctcgacaacatcaagagcaaccggggcgtc
gacctcgacctcgagacgatgggcctcgaggacgaagccgcgtaccagctcctgcagcgc
ggcgacacgctcggggtgttccagctcgacggtggcccgatgcgcgggctcctccgcttg
atgaagcccgacaacttcgaggacatctccgcgctcatcgccctgtaccgtccggggccg
atgggtgcgaactcgcacacgaactacgcgctccgcaagaacggcgagcagccgatcacc
ccgatccacccggagctcgaggagccgctccaggacatcatcggcacgacctacggcctg
atcatctaccaggagcaggtcatggccatcgcgcagaaggtcgccggcttctccctcgga
caggccgacatcctccgccgcgcgatgggcaagaagaagaagtccgagctcgacaagcag
tacgccggcttcgagaagggcatgcaggacaacggctactcggccgcggcgatcaagacg
ctgtgggacatcctgctgccgttctccgactacgcgttcaacaaggcgcactccgcggcg
tacggcgtggtctcgttctggacggcgtacctcaaggcgcactacccggccgagtacatg
gccgcgctcctgaccagcgtcggtgacgcacgcgacaagctcgcgctgtacctcaacgag
tgccgccggatgggcatcaaggtgatgccgccggacgtcaacgagtcgatcggcttcttc
gcggccgtcggcgacgacatccgcttcggcatgggcgcgatccgcaacgtcggcttcaac
gtcgtcgacgacatcgtgcaggcccggaccgagaagggtgcgttcgagtcgttccacgac
ttcctgcggaagatcccgatctcgtcggccaacaagcggaccgtcgagtcgctcatcaag
gccggtgccttcgacgagttcggcgacagccgccgggcgctcgtcgagatccacgagggc
gcggtcgagagcgccgtcaaggtcaagcgcgacgaggcccacggcaacgtcggcttcgac
ttcgactcgctgttcgccgaggtcgccgaggagcagccgtcctcggctccggtgtcgcag
gtgccggagcggccggagtgggccaagcgcgacaagctcgccttcgagcgcgacatgctc
ggcctctacgtgtccgaccacccgctcgccggactcgagatcgagctcgcgaagcaccag
tcgatcaccatcgccgacctcatcgcggcggacgactcggtcgagggcgagaccgtcacg
gtcgcggggctcctgacgagcgtccagcaccgtgtcgcgaagtcgagcggcaacccgtac
ggcatcgtccagatcgaggacttcggcggcgagatcggcgtcatgttcctcggcaagacc
tacgccgagttcggaccatcgctcgtggccgactcgatcgtcgtgctgcgcggccgggtg
aacgtccgcgacgacggcaaggccctgcacgcggtcagcatgttccagccgaacgtcggc
gacgcgatgggctccggcccgctcacgctgtccctgccggagcgccaggccacgacgacg
acggtcaccgagctcgcggcggtgctcgggcggcaccagggcgagaccgaggtgcggctg
cggctcctgaaggaggacgtcgcgcgcacgttcgagctgccgttcccggtcaacctgacg
ccggacctgttcggggagctgaagagcctgctcggcccgcgctgcctggtctag
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integrated database retrieval system
