Curtobacterium citreum: QPK07_08940
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Entry
QPK07_08940 CDS
T09163
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccit
Curtobacterium citreum
Pathway
ccit03030
DNA replication
ccit03410
Base excision repair
ccit03420
Nucleotide excision repair
ccit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QPK07_08940 (polA)
03410 Base excision repair
QPK07_08940 (polA)
03420 Nucleotide excision repair
QPK07_08940 (polA)
03440 Homologous recombination
QPK07_08940 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccit03032
]
QPK07_08940 (polA)
03400 DNA repair and recombination proteins [BR:
ccit03400
]
QPK07_08940 (polA)
Enzymes [BR:
ccit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QPK07_08940 (polA)
DNA replication proteins [BR:
ccit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QPK07_08940 (polA)
DNA repair and recombination proteins [BR:
ccit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QPK07_08940 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QPK07_08940 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
NYN_YacP
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
WIJ43896
LinkDB
All DBs
Position
complement(1875187..1877859)
Genome browser
AA seq
890 aa
AA seq
DB search
MSDSAKPTLMVIDGHSLAFRAFYALPVDSFVNREGQHTNAIHGFISMLLMLLQREKPTHL
AVAFDISRFSFRTREYEDYKGTRSETPAEFKGQIPLLQQALEAMGITTVTKEDYEADDIL
ATLARQGSEQGYQVYVVSGDRDSIQLVNDDVTLLYPSVRGVSELTRYDRDKVYERYGIEP
HQYPDIAALVGETSDNLIGIDKVGEKTAVKWITAYGSLDGVLEHADEIKGVVGNNLREQK
DRAIRNRKLNRLVNDVELPVGPGDVALRPLDEQAVRDLFAKLQFRTLLDRVFKVAGTGEP
SDAAESTGSVDSGAPTPPPVKTVIDEELGYWLDRKAANDAENGFGVAVEVIDGRLSAIGI
ATHDDAVLVPGGSGTKDYEQLAAWFASDAPKHFHDAKAAIKALATVGFTVRGIAGDARLT
GWLAQPGKQGQPLSDLVYQELGEELPTADPNQLVPETDPVNVGVHAWYVLRVDTALRARV
DESSLRVLDTIELPLVPVLAGMETTGVAIDRPVLTGLSHDLGERAAELAQQAFAEIGHEV
NLGSPKQLQEVLFTELAMPKTRKTKTGFSTDAASLADLQEQHPHPFLGLLLQHRDATKLR
QIVDTLDAAVVDGRIHTSYEQTGSSTGRISSTDPNLQNIPVKTAVGRRVRSAFAVAEPYT
TLVTADYSQIEMRIMAHLSGDPGLIQAFNEGEDLHRFVGARVFGVEPADVSAEMRTKVKA
MSYGLAYGLSPFGLSKQLRIDQSEARTLMNEYFARFGAVRDYLRGVVEQAREDGYTETIF
GRRRPFPDLKSPNRVLRENAERAALNAPIQGSAADIMKIAMLGVDADLRAGGLESHLLLQ
VHDELILEVAPGEQERVEEILRTRMGGAAELSVPLDVSVGVGPNWEAAAH
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggactccgcaaagcctaccctcatggtcatcgacggccactcgctcgccttccgg
gccttctacgcgctcccggtcgacagcttcgtgaaccgcgaggggcagcacacgaacgcc
atccacggcttcatctcgatgctgctcatgctcctccagcgcgagaagcccacgcacctc
gccgtcgcgttcgacatctcccgcttctcgttccgcacgcgcgagtacgaggactacaag
ggcacccgctccgagaccccggccgagttcaagggccagatcccgctcctgcagcaggcg
ctcgaggcgatgggcatcacgacggtcacgaaggaggactacgaggccgacgacatcctc
gccacgctcgcccgccagggctcggagcaggggtaccaggtgtacgtcgtgtccggtgac
cgcgactcgatccagctcgtgaacgacgacgtcacgctgctctacccgtccgtccgcggg
gtctccgagctcacccgctacgaccgcgacaaggtgtacgagcgctacggcatcgagccg
caccagtacccggacatcgcggcactcgtcggcgagaccagcgacaacctgatcggcatc
gacaaggtcggcgagaagaccgccgtcaagtggatcaccgcgtacgggtcgctcgacggc
gtgctcgagcacgcggacgagatcaagggcgtcgtcggcaacaacctgcgcgagcagaag
gaccgggcgatccggaaccggaagctgaaccggctcgtgaacgacgtcgagctgccggtc
ggccccggcgacgtggcgctccgtccgctcgacgagcaggccgtccgcgacctcttcgcg
aagctgcagttccgtacgctgctcgaccgggtgttcaaggtcgccggcacgggcgagccg
tccgacgcagcggagtcgacgggctccgtcgacagcggtgcgccgaccccgccgcccgtc
aagaccgtcatcgacgaggagctcgggtactggctcgaccgcaaggccgcgaacgacgcc
gagaacgggttcggcgtcgcggtcgaggtcatcgacggccgactgagcgccatcggcatc
gcgacgcacgacgacgccgtgctcgtccccggcggcagcggtacgaaggactacgagcag
ctcgcggcctggttcgcgtcggacgcgcccaagcacttccacgacgccaaggccgcgatc
aaggccctcgcgacggtcgggttcacggtgcgggggatcgcgggcgacgcgcgcctcacc
gggtggctcgcccagccggggaagcagggccagccgctgtccgacctcgtgtaccaggag
ctcggcgaggaactgccgaccgccgacccgaaccagctcgtccccgagaccgacccggtg
aacgtcggtgtgcacgcctggtacgtcctccgtgtcgacaccgccctgcgcgcgcgcgtc
gacgagtcctcgctccgcgtgctcgacaccatcgagctgccgctcgtgccggtgctcgcc
ggcatggagaccaccggcgtcgcgatcgaccgccccgtcctcaccgggctgtcgcacgac
ctgggtgagcgcgccgcggagctcgcgcagcaggcgttcgccgagatcgggcacgaggtc
aacctcggctcgccgaagcagctgcaggaggtgctcttcaccgagctcgcgatgccgaag
acgcggaagaccaagaccggcttctcgaccgacgccgcgagcctcgccgacctgcaggag
cagcacccgcacccgttcctcggactgctgctgcagcaccgtgacgcgacgaagctccgg
cagatcgtggacacgctcgacgccgcggtcgtcgacggccgcatccacacgagctacgag
cagaccggcagcagcaccggccggatctcgtcgaccgacccgaacctgcagaacatcccc
gtcaagaccgcggtcggacgccgggtccgctcggccttcgcggtcgccgagccgtacacg
accctggtcacggccgactactcgcagatcgagatgcgcatcatggcgcacctgtccggc
gaccccgggctcatccaggcattcaacgagggcgaggacctgcaccgtttcgtcggcgcg
cgggtcttcggggtcgagccggcggacgtcagcgccgagatgcgcacgaaggtcaaggcg
atgtcgtacggcctcgcctacggcctgagcccgttcggtctgtcgaagcagctccgcatc
gaccagtccgaggcgcgcacgctcatgaacgagtacttcgcccgcttcggtgccgtgcgc
gactacctgcgcggggtcgtggagcaggcgcgcgaggacggctacaccgagacgatcttc
ggccgccgccgacccttccccgacctgaagagcccgaaccgggtcctccgcgagaacgcc
gagcgcgccgcgctgaacgcaccgatccaggggtccgcggcggacatcatgaagatcgcg
atgctcggtgtcgacgccgacctgcgggccggcgggctcgagtcgcacctgctgctccag
gtgcacgacgagctcatcctcgaggtcgcccccggcgagcaggagcgcgtcgaggagatc
ctgcgcacccggatgggcggcgctgccgagctcagcgtccccctggacgtctccgtcggc
gtcggcccgaactgggaggccgcggcgcactga
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