Curtobacterium citreum: QPK07_11105
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Entry
QPK07_11105 CDS
T09163
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccit
Curtobacterium citreum
Brite
KEGG Orthology (KO) [BR:
ccit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccit03032
]
QPK07_11105 (topA)
03400 DNA repair and recombination proteins [BR:
ccit03400
]
QPK07_11105 (topA)
Enzymes [BR:
ccit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QPK07_11105 (topA)
DNA replication proteins [BR:
ccit03032
]
Prokaryotic type
DNA Topoisomerases
QPK07_11105 (topA)
DNA repair and recombination proteins [BR:
ccit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QPK07_11105 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WIJ44289
LinkDB
All DBs
Position
complement(2359955..2363227)
Genome browser
AA seq
1090 aa
AA seq
DB search
MSGRRGSPVLRSDRGSATIVLVGVVALVLLVGSVALGAARDRVLSTRAAATADSAAIAAA
GAAVGLVAGAPCAAAGRVANANDARLTDCRTAGSVARVGVTVGSGAFAVGALAVAGPPTG
SCRQCVYGVHVGPRSPSSRSSMVPVRDGAGVHHRSRSHVPGTKKLVIVESPAKAKTIAQY
LGDGYEVQASVGHIRDLVEPKNLPAELKKGSLGKFSVDVDNGFEPYYVVSDAKKKTVTEL
KRALKDADELYLATDEDREGEAIAWHLLQVLKPKVPVKRMVFHEITKEAIQRAQEATREL
DTALVDAQETRRILDRLYGYEVSPVLWRKVGPGLSAGRVQSAATRLVVDRERERLAFVSA
NYWDLTARFEKVGDTAFTARLARLQGTRVASGRDFDDRGALKGEAVRLDEASAAALTRVL
EQAGDAVVRSVDSKPYTRRPAAPFTTSTLQQEAARKLRFSARQTMSVAQGLYENGHITYM
RTDSSSLSQQAITAARKQASSLYGPETIPDKPRSYAGKSKNAQEAHEAIRPAGDTFKTPS
EMEGVLRGNDWKLYDLIWKRTVASQMADAKGSTASVVLGITSTEPVTGLASTANGTDAEF
TASGTVITFRGFLNAYEEGRDEERHSGADGADAKLPQMAEGDHLGVSEVDAKGHDTSAPP
RYTEASLVKTLEELGIGRPSTYAAIISTIMDRGYVTQRGSALVPNWIAFSVVRLLEDHFA
DLVQYDFTAGMEEDLDRIASGDEDRVDWLKEFYFGGGDQRGLRTVIDNLGEIDARDINSV
ELAPGLTLRIGRYGPYIEVPGEDPEKPRRVNVPEDLAPDELTAEKAQELVDAPVVGDRVV
GINPESGKEVLAKDGRFGPYVTERSPEPEPTVDPATGEVTESAPAEAATASAATTTAAGT
TATKAPAKKTTKKAAAPKERTASLFKSMDPQTVDLETALKLLDLPRVVGKDPESGEDITA
QNGRYGPYIKKGTDTRTLPSEDAIFEVDLPGALELFAQPKYGGRRTASAALKEFEADPVS
GKPIKVKDGRFGPYVTDGETNATIPRGEDVESVDHARAVQLLADKRAKGPVKKKAPARKA
APKKAAPKKQ
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgggcgccgggggagtccggtgctccggtcggaccgcggttcggcgacgatcgtg
ctggtcggggtcgtcgccctcgtcctgctcgtcggctcggtggcgctcggcgccgcgcgc
gaccgggtcctgtcgacccgtgcggcggccacggcggactcggcggcgatcgccgctgcc
ggggccgccgtcgggctcgtggccggtgcgccgtgcgccgctgccggtcgggtcgccaac
gcgaatgacgcgcggctcaccgactgtcggacggcgggctccgtcgcccgggtcggcgtc
acggtcggttccggagcgttcgccgtgggcgcgctcgcggtggccggtccgcccaccggg
tcgtgccgacagtgtgtgtatggtgtgcacgtcggcccccggtcaccgtcgtcccggtcg
tccatggtccccgtgcgggacggagccggcgtgcaccatcgatcaaggagtcacgtgcca
ggcacgaagaagctcgtgatcgtcgagagccccgcgaaggcgaagacgatcgcgcaatac
ctcggtgacggatacgaagtccaggcgtcagtcggacacatccgcgacctcgtcgagccc
aagaacctgccggccgagctgaagaaggggtcgctcggcaagttctccgtcgacgtcgac
aacggcttcgagccctactacgtggtctccgacgcgaagaagaagacggtgaccgagctc
aagcgggcgctcaaggacgccgacgagctctacctcgcaactgatgaagaccgcgagggc
gaggccatcgcgtggcacctcctgcaggtgctcaagcccaaggtgcccgtgaagcgcatg
gtgttccacgagatcacgaaggaggccatccagcgcgcgcaggaggccacccgcgaactc
gacaccgcgctcgtcgacgcccaggagacccgtcgcatcctcgaccggctctacgggtac
gaggtctcgccggtgctctggcgcaaggtcggccccgggctgtccgccgggcgcgtgcag
tccgccgccacccgtctcgtcgtggaccgggagcgcgagcgcctggcgttcgtctcggcg
aactactgggacctgacagcgcgtttcgagaaggtcggcgacaccgccttcaccgcccgg
ctcgctcgtctccagggcacccgcgtggcctccggtcgcgacttcgacgaccgcggtgcg
ctcaagggcgaggccgtccggctggacgaggcgtccgccgctgccctgacccgcgtgctc
gagcaggccggcgacgccgtcgtccgcagcgtcgactcgaagccgtacacccgccgtccg
gccgcgccgttcaccacctcgacgctccagcaggaggccgcgcggaagctccgcttctcg
gctcggcagacgatgagcgtcgcacaggggctgtacgagaacggccacatcacctacatg
cgaacggactcgtcgtccctgtcgcagcaggcgatcaccgccgcccgcaagcaggcgtcg
tcgctgtacggaccggagaccatcccggacaagccgcgcagctacgccggcaagagcaag
aacgcgcaggaggcgcacgaggccatccggcccgcgggcgacaccttcaagaccccgtcc
gagatggagggggtcctgcgcggcaacgactggaagctctacgacctcatctggaagcgc
acggtcgcgtcgcagatggcggacgccaagggctcgaccgcgtcggtcgtcctcgggatc
acgtcgaccgagcccgtcacgggcctggcgtcgacggcgaacggcacggacgcggagttc
accgcgtccggtaccgtgatcaccttccgcgggttcctcaacgcgtacgaggaaggtcgc
gacgaggagcgccacagcggtgccgacggcgcggacgcgaagcttccgcagatggccgag
ggagaccacctcggcgtcagcgaggtcgacgccaaggggcacgacacctcggccccgccg
cggtacaccgaggcgagcctggtgaagacgctcgaggagctcggcatcggccgaccctcg
acgtacgccgcgatcatctcgacgatcatggaccgcggctacgtgacccagcgcggcagc
gcactcgtgccgaactggatcgcgttcagcgtggtccgactgctcgaggaccacttcgcc
gacctggtgcagtacgacttcaccgccgggatggaagaggacctcgaccggatcgccagc
ggcgacgaggaccgggtcgactggctcaaggagttctacttcggcggcggcgaccagcgc
ggtctgcgcaccgtcatcgacaacctcggcgagatcgacgcccgggacatcaactcggtc
gagctcgcgccggggctcacgctccgcatcggtcggtacggcccctacatcgaggtgccg
ggcgaggaccccgagaagccccgacgcgtgaacgtccccgaggacctggcgccggacgag
ctcaccgccgagaaggcacaggagctcgtcgacgccccggtcgtcggcgaccgcgtcgtg
ggcatcaatccggagtccgggaaggaggtcctggcgaaggacggtcggttcggcccgtac
gtcaccgagcggagccccgagcccgagcccaccgtggaccccgcgaccggcgaggtgacg
gagtccgccccggccgaggccgccaccgcctcagcagcgacgacgaccgcagcggggacg
accgcgacgaaggcgccggcgaagaagaccacgaagaaggccgccgcgccgaaggagcgc
accgcgtcgctcttcaagtcgatggacccgcagaccgtcgacttggagaccgcgctgaag
ctcctcgacctgccccgtgtcgtcgggaaggacccggagtccggcgaggacatcacggcg
cagaacggccgctacggtccgtacatcaagaagggcacggacaccaggaccctgccgagc
gaggacgcgatcttcgaggtcgacctgcccggcgcgctcgagctgttcgcccagccgaag
tacggcggccgtcggaccgcgagcgccgcgctcaaggagttcgaggcggacccggtgtcg
ggcaagccgatcaaggtgaaggacggccgcttcggtccgtacgtcaccgacggggagacg
aacgccacgatcccgcgcggtgaggacgtcgagtccgtcgaccacgcccgtgccgtgcag
ctcctggcggacaagcgtgccaagggtccggtcaagaagaaggccccggcgcggaaggcc
gctccgaagaaggccgccccgaagaagcagtga
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