Curtobacterium citreum: QPK07_14645
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Entry
QPK07_14645 CDS
T09163
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ccit
Curtobacterium citreum
Pathway
ccit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccit00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QPK07_14645
09124 Replication and repair
03420 Nucleotide excision repair
QPK07_14645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccit03021
]
QPK07_14645
03400 DNA repair and recombination proteins [BR:
ccit03400
]
QPK07_14645
Enzymes [BR:
ccit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QPK07_14645
Transcription machinery [BR:
ccit03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
QPK07_14645
DNA repair and recombination proteins [BR:
ccit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
QPK07_14645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WIJ44944
LinkDB
All DBs
Position
3092788..3094482
Genome browser
AA seq
564 aa
AA seq
DB search
MNGPLIVQSDRTVLLEVAHPDAEDARHELAAFAELERAPEHVHTYRITRLGLWNARAAGH
DAESMIGTLERFAKFPVPQSVTVDIRDTVSRYGRLVIRREERPDAPAIANSPTEELERQP
VLLLTAEDPSVLAEVTRSKRIKPLLGDQRSSSEIELQPWARGQVKQELVKLGWPAEDLAG
YTPGQPHPIDLDTASWHMRPYQEQAVDTFFAQGSGVVVLPCGAGKTLVGAGAMATVKATT
LILVTNTVSARQWRDELLRRTTLTADDIGEYSGTSKEIRPVTIATYQILTARRKGEYTHL
SLLDALDWGLIVYDEVHLLPAPVFKLTADLQARRRLGLTATLVREDGRESDVFSLIGPKR
YDAPWKEIEAQGYISPAACYEVRIDLPHADRLEYAASGDDERYRLAATSPAKTPVVRELI
EKHRGEQILVIGQYIDQLDALAESLDAAEITGATPVDERERLFRAFRQGDIDVLVVSKVA
NFSVDLPDATVAIQVSGSFGSRQEEAQRLGRLLRPNKDGLPASFYTLVTRDTVDQDFAQN
RQRFLAEQGYAYTILDADQVQAAA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaccgctgatcgtgcagagcgaccgcaccgtgctcctcgaggtcgcgcacccc
gacgccgaggacgcgcggcacgagctcgccgcattcgccgagctcgaacgcgcccctgag
cacgtgcacacgtaccggatcacgcggctcgggctctggaacgcacgggccgcggggcac
gacgccgagtcgatgatcggcacgctcgagcgcttcgcgaagttcccggtcccgcagagc
gtcacggtggacatccgcgacacggtgtcgcgctacggacggctcgtgatccgtcgcgag
gagcgtccggacgccccggcgatcgcgaactcaccgaccgaggagctcgagcgccagccc
gtgctgctcctgacggccgaggacccctccgtcctcgccgaggtgacccgctcgaagcgg
atcaagccgctgctcggcgaccagcggtcgtcctcggagatcgagctgcagccgtgggca
cggggccaggtcaagcaggagctcgtgaagctcggctggccggccgaggacctcgccggc
tacacgcccgggcagccgcacccgatcgacctcgacacggcgtcgtggcacatgcggccg
taccaggagcaggcggtcgacaccttcttcgcgcagggttccggcgtcgtcgtgctgccc
tgcggcgccggcaagacgctggtcggtgccggtgcgatggcgaccgtcaaggcgacgacg
ctcatcctcgtcacgaacaccgtgtccgcgcggcagtggcgcgacgagctgctccgccgg
acgaccctgaccgcggacgacatcggcgagtactcgggcacgtcgaaggagatccgcccg
gtcacgatcgcgacgtaccagatcctcaccgcccgccggaagggcgagtacacgcacctg
tcgctcctcgacgccctcgactggggcctcatcgtctacgacgaggtccacctgctcccc
gcgccggtgttcaagctgacggcggacctgcaggcgcgccgtcggctcggcctgaccgcg
acgctcgtgcgagaggacggccgcgagagcgacgtgttctcgctcatcgggccgaagcgc
tacgacgccccgtggaaggagatcgaggcccagggctacatctcccccgccgcctgctac
gaggtgcggatcgacctgccgcacgccgaccgactggagtacgccgcgtccggcgacgac
gagcgctaccggctcgccgcgacgtcaccggcgaagaccccggtcgtgcgggagctcatc
gagaagcaccgcggcgagcagatcctggtgatcgggcagtacatcgaccagctcgacgcg
ctcgcggagtcgctcgacgccgcggagatcaccggggcgacgcccgtcgacgaacgcgag
cggctgttccgggcgttccggcagggcgacatcgacgtcctggtcgtctcgaaggtcgcg
aacttctccgtcgacctgcccgacgcgaccgtggcgatccaggtgtccggctccttcggg
tcccgtcaggaagaggcccagcgactcggccggctcctgcgcccgaacaaggacggtctg
ccggcgtcgttctacacgctcgtgacgcgggacaccgtcgaccaggacttcgcacagaac
cggcagcggttcctcgcggagcaggggtacgcgtacaccatcctcgacgccgaccaggtc
caggcagccgcgtag
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