Curtobacterium citreum: QPK07_15730
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Entry
QPK07_15730 CDS
T09163
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ccit
Curtobacterium citreum
Pathway
ccit03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccit00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QPK07_15730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccit03021
]
QPK07_15730
03400 DNA repair and recombination proteins [BR:
ccit03400
]
QPK07_15730
Enzymes [BR:
ccit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QPK07_15730
Transcription machinery [BR:
ccit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QPK07_15730
DNA repair and recombination proteins [BR:
ccit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QPK07_15730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WIJ45150
LinkDB
All DBs
Position
complement(3314198..3318079)
Genome browser
AA seq
1293 aa
AA seq
DB search
MLEATSFDAIRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMIIDIDEEGRHADMPGLENEMRLEIKNLEGQRDSIIADRLKKLEDD
LAALEEEGAKADVKRRTKDTAEKEMSQVRKSFDEDITRLERVWEDFRNLKVGDLKPEDAV
FHELQDRFGIYFDAYMGAEAIKLRLEAFDLAAEAEALRLQIAEGKGQKKIRAIKRLRVVS
SFLATGNSPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLSHAQNIKSAKRMVERSR
PQVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPAQDMIIGLHHLTTVREGAVGEGR
SFSSVAEAIMAKDQNTLDLNAMVKIRMSGVHFAEGEAPEGYEVGQSILLETTLGRALFNE
TLPADYPFVQRVTDKGTLSAIVNDLAERYSKTETAAALDRIKDAGFYWGTRSGVTVALSD
VVTPPRKKEIIAGYEVQAAKVQGEFDKGLITDAERRADLIKIWTEATNEIAQEMRDNFPI
DNTINRMVSSGARGNWLQVRNIAGMRGLVNNPKGEIIARPIINSYREGLTVAEYFIATHG
ARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTTRGLELPIATKGEDGKLVRDPR
VENTVYSRTLAVEAVDANGTVVAEAGSDVGDVLLDTLLEAGVESIKVRSVLTCESAVGVC
AKCYGRSLATGNLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVTE
LFEARTPKGASPIAEAPGRVTIEDTDKGRRIILTPDNGDEPFIYPVLKRATLLIEDGQHV
ELGEQFIAGTVDPKEVLRVKGVREVQKHLVNGVQDVYGSQGVPIHDKHIEVIVRQMLRKV
TVVDHGDTDLLPGELVDRSRYNALNRAALQEGRKTASARQEVMGITKASLATESWLSAAS
FQETTRVLTQAAMEGKQDHLVGLKENVIIGKLIPAGTGLSRYRDVDVAATEEAKAERYPN
RIFADDSSFSDADLSFVDFDSFSSDDFTPGTYN
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgaagcaacttcctttgacgccatccggatcggtctcgcgaccgccgaggacatc
cgtcagtggtcgtacggcgaggtcaagaagccggagaccatcaactaccgcaccctgaag
cccgagaaggacggtctgttcggcgagcagatcttcggtccgtcccgggactgggagtgc
gcctgcggcaagtacaagcgcgtgcgcttcaagggcatcgtgtgcgagcgctgcggcgtc
gaggtcaccaagtcctcggtccgtcgtgagcgcatgggccacatcgagctcgccgccccc
gtcacgcacatctggtacttcaagggcgtcccgtcgcgcctcgggtacctcctcgacatg
gcgccgaaggacctcgagaaggtcatctacttcgcggcgtacatgatcatcgacatcgat
gaagagggccgtcacgccgacatgcccggtctcgagaacgagatgcgcctcgagatcaag
aacctcgagggtcagcgcgactcgatcatcgccgaccgcctcaagaagctcgaggacgac
ctcgcagcgctcgaggaagagggcgccaaggccgacgtgaagcgccggaccaaggacacc
gccgagaaggagatgtcccaggtccgcaagtccttcgacgaggacatcacccgcctcgag
cgcgtgtgggaggacttccgcaacctcaaggtgggcgacctcaagcccgaggacgccgtc
ttccacgagctccaggaccgcttcgggatctacttcgacgcctacatgggcgccgaggcg
atcaagctgcggctcgaggcgttcgacctggccgccgaggccgaggcgctgcgcctgcag
atcgccgagggcaagggccagaagaagatccgcgcgatcaagcgtctgcgcgtcgtcagc
tccttcctcgccaccggcaactcgccggccgcgatggtgctcgacgtcgtgccggtcatc
ccgccggagctccgcccgatggtgcagctcgacggtggccgcttcgccacgtcggacctc
aacgacctctaccgtcgtgtgatcaaccgcaacaaccgtctccgccgcctgctcgacctc
ggtgcccccgagatcatcgtcaacaacgagaagcgcatgctgcaggaagcggtcgacgcg
ctgttcgacaacggtcgtcgtggtcgtcccgtcacgggtaccggcaaccgcgccctgaag
tccctgagcgacatgctcaagggcaagcagggtcgattccgccagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcatcgtcggcccgcagctcaagctgcaccag
tgcggtctgccgaagcagatggcgctcgagctgttcaagccgttcgtcatcaagcgcctg
atcgacctgtcgcacgcgcagaacatcaagtcggccaagcgcatggtcgagcgttcgcgt
ccgcaggtgtgggacgtgctcgaggagatcatccgcgagcgccccgtgctgctgaaccgt
gcgccgacgctgcaccgtctgggcatccaggcgttcgagccgcagctcgtcgagggcaag
gccatccagctccacccgctcgtgtgtgctgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtcggtcgaggcccaggccgaggcccgcatcctgatgctc
gcgtcgaacaacatcctcaagccgtcggacggccgtccggtgaccctgcccgcacaggac
atgatcatcggtctgcaccacctgacgaccgtccgcgagggcgccgtcggtgagggccgt
tcgttctcctcggtcgccgaggcgatcatggcgaaggaccagaacacgctggacctcaac
gcgatggtgaagatccgcatgtcgggtgtccacttcgccgagggcgaggctcccgagggc
tacgaggtgggtcagtcgatcctcctcgagaccacgctgggccgcgcgctcttcaacgag
accctgccggcggactacccgttcgtgcagcgcgtcaccgacaagggcaccctctccgcg
atcgtcaacgacctcgccgagcgctactccaagaccgagacggccgccgcgctggaccgg
atcaaggacgcgggcttctactggggcacgcgctccggtgtgaccgtcgcgctctccgac
gtcgtgacgccgccgcgcaagaaggagatcatcgcgggctacgaggtccaggccgccaag
gtccagggcgagttcgacaagggtctgatcaccgacgcggagcgccgcgccgacctgatc
aagatctggaccgaggccacgaacgagatcgcgcaggagatgcgcgacaacttcccgatc
gacaacaccatcaaccgcatggtgtcgtcgggtgctcgtggtaactggctgcaggtgcgc
aacatcgccggtatgcgtggtctggtgaacaacccgaagggtgagatcatcgcccgcccg
atcatcaactcgtaccgcgagggcctgaccgtggcggagtacttcatcgccacgcacggt
gcgcgcaagggtctggcggacacggctctccgtaccgccgactcgggctacctgacgcgt
cgtctcgtcgacgtctcgcaggacgtcatcatccgtgaggacgactgcggcacgacccgt
ggcctcgagctgccgatcgcgaccaagggcgaggacggcaagctcgtccgcgacccgcgc
gtcgagaacacggtgtactcgcgcaccctggccgtcgaggccgtggacgcgaacggcacc
gtggtggccgaggccggttcggacgtcggcgacgtcctgctggacacgctgctcgaggca
ggtgtcgagagcatcaaggtgcgctcggtcctgacctgcgagtccgccgtcggtgtctgc
gcgaagtgctacggccgttcgctcgccacgggcaacctcgtcgacatcggcgaggcggtc
ggcatcatcgccgcccagtccatcggtgagcccggtacccagctgacgatgcgtaccttc
cacacgggtggttcggcgtcggccgacgacatcacgcagggtctgccccgcgtgacggag
ctcttcgaggcccgcaccccgaagggcgcgtccccgatcgccgaggcccccggccgcgtc
acgatcgaggacacggacaagggtcgtcggatcatcctcacgccggacaacggcgacgag
ccgttcatctacccggtgctcaagcgtgcgaccctcctcatcgaggacggccagcacgtc
gagctcggcgagcagttcatcgccggcacggtggacccgaaggaggtcctccgggtcaag
ggtgtgcgcgaggtccagaagcacctcgtcaacggcgtgcaggacgtgtacggctcgcag
ggcgtgccgatccacgacaagcacatcgaggtcatcgtccgtcagatgctccgcaaggtc
accgtcgtcgaccacggcgacaccgacctgctgccgggtgagctcgtcgaccggtcgcgc
tacaacgcgctgaaccgtgcggcgctgcaggagggtcgcaagaccgcctcggctcgccag
gaggtcatgggcatcacgaaggcgtccctcgcgaccgagtcgtggctgtccgccgcgtcc
ttccaggagaccacccgcgtcctcacgcaggcggccatggagggcaagcaggaccacctc
gtcggcctcaaggagaacgtcatcatcggtaagctcatccccgccgggacgggcctcagc
cggtaccgtgacgtggacgtcgccgcgaccgaggaagccaaggcggagcggtaccccaac
cgcatcttcgccgacgactcctcgttctcggacgccgacctgagcttcgtcgacttcgac
agcttctcgtcggacgacttcacgcccgggacctacaactga
DBGET
integrated database retrieval system
