Corynebacterium camporealensis: UL81_00430
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Entry
UL81_00430 CDS
T03923
Symbol
hrpB
Name
(GenBank) HrpA-like helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
ccj
Corynebacterium camporealensis
Brite
KEGG Orthology (KO) [BR:
ccj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccj03019
]
UL81_00430 (hrpB)
Enzymes [BR:
ccj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
UL81_00430 (hrpB)
Messenger RNA biogenesis [BR:
ccj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
UL81_00430 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
AAA_30
AAA_11
AAA_19
ResIII
AAA_16
AAA_22
Helicase_RecD
ParA
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AKE38079
UniProt:
A0A0F6T9F6
LinkDB
All DBs
Position
complement(79733..81976)
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AA seq
747 aa
AA seq
DB search
MFNLARIGEGLPVAKTIDSLPSEGNVVVQAPPGTGKTTLIPPALSNQVEGKVLVTAPRRV
AVRAAAARLRHLSGTPKAVGHAVRGDSQPGTHVEFVTPGVLLRRLIRDPELEGVSAVAID
EVHERQLDSDLVLGMCLELAELREDFRVVAMSATVDAQRFSQLMDAPVHVTEAVTHPLDI
SYAPAPGRAAGTREFYAHVASQAASQSSSTLVFVPGVREVNLVCDLLNGHNVFPLHGRQT
TAEQDAALYTDETRIVVATSIAESSLTVPGVRAVIDAGLSRVPRRDAQRGMSGLVTVSTS
KSSADQRAGRAGREAPGTVVRCYSQDDYQHFAPHIQPEIKSADLTQAALFLRCWGAGPDF
PLLDTPPTSALQKANTTLDRIGATEELALLPTEPRLGATLLKYGARAAGTIAKLSDNPKH
EQKRLAKLVPDKGPADPGAVIATAFPEQVAKRVGDDYLLASGTRARLLDKSGLKGSPWLA
VAEVSLSNANNAIIRAAERISEEDALDIVGVTEEVTAQLVDGKIRGRKLRRAGAIELSST
PIKVTGQAAADALATGIRTQGLDLFRWSEKATNLKQRLDHLHAHYGQPWPNVSEADPAEW
LGPELRQIADGTPIKSIDLHPALQRLLPWPEATHLDELAPECLPVPSGRTVALDWSGDRP
VASVKLQECFGLAESPEFCGQRVQFHLLSPAGRPLAVTDDLASFWAGPYAGVRADMRGRY
PKHPWPEDPWNAPATAKTTAAMRGTRS
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatctcgcgcgcattggggaaggtcttccggtagctaagaccatcgacagtttg
cccagtgaaggcaacgtcgtcgtccaggccccacctggtaccggtaagaccacgctcatt
ccgccagcactctccaaccaagtggagggtaaagtcctggtgacagcaccgcgtcgtgtg
gcagtacgtgctgcagccgcccggcttcgtcacctatctggcaccccgaaagccgtcggt
catgccgtacgcggcgactcccaacccggcacccacgtcgaatttgtgaccccaggtgtt
ctgctgcgccgtctcattcgcgaccccgagctcgagggcgtttccgccgttgctatcgac
gaggtccacgaacgccaactcgacagcgacctcgtccttggcatgtgcctggaactcgct
gaactccgtgaggacttccgcgtggttgcgatgtctgcaactgtcgatgcccagcgcttc
tcccagctcatggacgcacccgtccatgtcaccgaggccgtcacgcatcccctcgacatc
tcctatgcacctgcgccgggcagggctgccggcacgcgggagttttatgcgcatgtggcg
agccaggcggcatcgcaaagcagctctaccttggtgtttgtccccggcgtacgggaggtc
aacctggtctgcgacttactcaatgggcacaacgtgtttcccctgcatggccggcagacc
accgcggaacaagacgccgcactctacaccgacgagacccgcatcgtcgtggccacctcg
attgcagaatcctcgctgacggtgcccggagtgcgtgcagttatcgatgccggcttatcc
cgcgtcccccggcgcgacgcccaacgcggcatgtcgggcctcgtcacggtgtcaacgtcg
aagtccagcgcggaccaacgcgccggtcgtgccggccgcgaggcacctggcaccgtcgtg
cgctgctactcccaggacgactaccagcacttcgccccgcacatccagccggaaatcaaa
agcgccgacctcactcaggctgcgttgttcctgcgctgctggggtgcgggcccggacttc
ccgcttctcgataccccacccacctccgcactacaaaaagccaacaccaccctcgaccgc
attggtgccaccgaagaattagccctccttcccaccgagccccgcctcggtgcaaccctg
ctgaaatatggcgcgcgggcggcagggaccatcgccaagctcagcgataatcccaaacat
gaacagaaacgcctagccaagctggtgcccgacaaaggcccagccgaccccggcgcggta
attgcgaccgccttccccgaacaggtggccaaacgtgtaggcgacgactacctcctggcc
agcggcacccgtgcacgactcctcgataaatctggtcttaagggcagcccgtggctcgcc
gttgcggaggtctcgctgtccaatgccaacaacgccatcattcgcgcagctgagcgcatc
agcgaagaggatgcactcgatattgttggcgtcacggaggaggtcactgcacaacttgtc
gatggcaaaatccgcggccgcaagcttcgtcgcgccggggccatcgagctgagttcaact
cccatcaaggtcacgggccaagcagctgccgatgcccttgcgaccggcatccgcacccaa
ggcctcgacctgttccgctggtcagagaaggcaacgaacctcaaacagcggctggaccat
ctgcacgcgcactatggtcagccctggccgaacgtatccgaagcagaccctgccgagtgg
ctgggcccggagctgcgccagatcgccgatggcactcccatcaaatcgattgacctccac
cctgccctgcaacgactactgccctggccggaagcgacgcatctcgatgagctcgctcca
gaatgcctgccggtgccgtctggtcgcacggttgccctggactggtctggcgatcgtccc
gtggccagcgtgaagctgcaagagtgctttggtctggccgaatcaccggaattctgtggg
cagcgcgtgcaatttcatctactctcccctgcgggacgacccctcgcggtcaccgacgac
ctggctagcttctgggccggtccctatgcgggcgttcgcgcggatatgcgcgggcgctat
cccaaacatccctggccggaagacccgtggaatgcgccggcgacggctaaaaccactgct
gccatgcgaggtacacgctcataa
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