Corynebacterium camporealensis: UL81_08825
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Entry
UL81_08825 CDS
T03923
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ccj
Corynebacterium camporealensis
Pathway
ccj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UL81_08825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccj03019
]
UL81_08825
03009 Ribosome biogenesis [BR:
ccj03009
]
UL81_08825
Enzymes [BR:
ccj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
UL81_08825
Messenger RNA biogenesis [BR:
ccj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
UL81_08825
Ribosome biogenesis [BR:
ccj03009
]
Prokaryotic type
rRNA processing factors
UL81_08825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AKE39715
UniProt:
A0A0F6QXR6
LinkDB
All DBs
Position
complement(1859195..1862305)
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AA seq
1036 aa
AA seq
DB search
MMAKKPEDSTNTTENLEAAAVLISKLDRSEIGEKIRLYTLAKKIGLASKELVAQFAELDI
KKAPQSSVTAEEADKVLNHIVEADEKLRDRVRKNVANEIHQIEEKVEKEVEERREEEEED
KSSSEESADSSADDADDDDEQDEPEVEQDLGTMDIEKLHEALVEAGDDFEEDDAPVVTPM
PEDEPEVYDFAPIFKAPTPQPKRETESGKGRRRGSRGTSRGRGAEAETDTEQQDDVEQIE
EPKAVRGSTRIEAQRRRRSEMREKGHQRKHLVSQAEFLARRESVERTMVVRDKKRNDGGG
WITQVGVLEDDLLVEHFVTTESQASIIGNIYLGRVQNVLPSMEAAFIDIGTGRNGVLYAG
EVDWRAAGLGGRSRRIEQALKAGDQVLVQVTKDPLGHKGARLSTQISLAGRYLVYVPGGR
SAGISRKLPVPERKRLKDILERVVSDKGGAIIRTAAENVAEEAIASDVNRLQLQWDAITQ
RAEQEKSSKGAKPVTLYEEPDLLVKVVRDLFNEDFSHLVVDGRRSFNTVRAYVDSMAPDL
ADRVVEYQRNEHGGQDAFENYRIDEQLHKALSRKVWLPSGGTLIIERTEAMTVIDVNTGK
FTGSGGNLEETVTKNNLEAAEEIVRQMRLRDLGGMIVVDFIDMVLPENQELVLRRLKEAL
GRDRTRHQVSEVTSLGLVQMTRKRLGTGLLESFATECEHCHGRGLIVHEYPVDEEPEHDH
DNRKSRRSKKKNQDPAGHPAAKAMHRHEDAEDERQGAQNKSEHDKADNADKGDKKKSKKD
SDAELEELVANVVIEETPASRRRRRRKASSKGSRKEQKQQHDDKPSKKGDKPEKKAERKS
ERKADSKAEKPEQKQTYEEAVAEFEASPRRKRKTRGNSRSDHRPQRSDFEDAPQQQAEDV
AAEKQEKRTEMQVQRTSRKRRRAVRRTTKPKMEAAKVEASQQDAKQEDTKPKADKRQSDK
KETGKPKVTVRNSHGRRRAVRKTVRRKADSHDAAPKQQVKQQSAEAEQKPKADAKSSGSK
PSRGRGRRRVTRRGRK
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgatggctaaaaagcccgaagactcaaccaacacaactgaaaacctagaagccgcagcg
gtactgattagcaagttagaccgctcggaaatcggcgagaaaattcgcctctataccctg
gccaagaaaattggactggcctccaaagaactcgtcgcccaattcgccgagttagacatc
aagaaagcaccccaatcctctgtaaccgccgaggaagctgacaaggtgctcaaccacatc
gtcgaagccgacgaaaagctacgcgaccgcgtccgcaagaacgtcgccaacgaaatccac
caaatcgaagaaaaggtggaaaaggaagtcgaagaacgccgcgaagaagaggaagaagat
aagtcgtcctctgaggagtctgctgattcgtcggctgacgatgccgatgacgacgacgag
caggacgagcctgaggttgagcaggacctgggcaccatggacatcgaaaagctgcatgag
gccctcgtcgaagcaggcgatgacttcgaagaagacgacgccccagttgtgactccgatg
ccagaggatgagccggaggtctacgacttcgcaccgatctttaaggcaccgacgccgcag
ccgaagcgcgagactgaatctggcaagggccgtcgtcgcggcagccgtggaacctcgcgt
ggtcggggagcagaggctgagaccgataccgagcagcaggacgacgtcgagcagattgaa
gagccgaaggctgtgcgtggctcgactcgtattgaggcgcagcgtcgtcgtcgcagcgaa
atgcgcgagaagggacaccagcgcaagcatctggtctcccaggctgagttcttagcgcgc
cgggaatcggtggagcgcaccatggtcgtgcgcgataagaagcgcaacgatggcggcggc
tggattacccaggtcggcgtgctggaagacgatctgctggtcgagcacttcgtgaccacg
gagtcccaggcgtcgattattggcaacatctacttgggccgtgtgcagaacgtgcttccg
tcgatggaggctgccttcatcgatatcggaaccggtcgcaacggcgtgctttatgccggt
gaagttgattggcgtgctgccggtctgggcgggcgttcccgtcgcattgagcaggcgctc
aaggccggcgaccaggtactcgtacaggtcaccaaggacccgctgggccacaagggcgca
cgcctgagtactcagatttcgctggcgggtcgttacctggtgtacgtgccaggtggtcgc
agcgcaggtatctcgcgcaagctacccgtgccggagcgcaagcgtttgaaggacatcctg
gagcgcgtcgtatccgacaagggtggtgcgattattcgtaccgctgccgaaaacgtggct
gaggaagccattgcttccgacgtcaatcgtctgcagctgcagtgggatgccatcacccag
cgtgctgagcaggaaaagtcttctaagggcgccaagccggtcactctctacgaagagccg
gacctgctggtcaaggtcgtgcgtgacctcttcaacgaagacttctcccacttggtggtc
gatggtcgtcgttcctttaacaccgtgcgcgcttatgtcgattccatggctccggacctg
gctgatcgcgttgtcgagtaccagcgcaacgaacacggcggtcaggacgcgtttgagaac
taccgcatcgatgagcagctacataaggcactcagccgcaaggtctggctgccgtctggc
ggcacgctgattatcgagcgcaccgaagctatgaccgtcattgacgtcaacaccggtaag
ttcaccggttcaggcggcaacctggaagaaactgtcaccaagaacaacttggaggcagcc
gaggaaatcgtgcgccagatgcgtctgcgcgatctgggcggcatgattgtcgtcgacttc
atcgacatggtcctgcctgaaaaccaggagctggtcctgcgccgccttaaggaagccttg
ggccgtgaccgcacgcgccaccaggtctctgaggtgacctctctcggcttggtacagatg
acccgtaagcgcctgggaaccggccttctcgagtcctttgccactgagtgtgagcactgc
catggccgtggtctcattgtccacgagtacccggtggatgaagagcctgagcacgaccac
gacaaccgcaagtcccgccgttccaagaagaagaaccaggacccagctggtcaccctgcg
gcgaaggcgatgcatcgtcacgaagacgccgaggacgaaaggcagggtgctcagaacaag
tctgagcacgacaaggcagacaatgctgacaagggtgacaagaagaagtccaagaaggac
tccgatgcggagctggaagagctcgtcgccaatgtcgtgattgaggagactccggcatcg
cgtcgccgccgtcgtcgtaaagcaagctccaagggctcccgtaaggagcagaagcagcag
cacgacgataagccttccaagaagggcgataagcccgagaagaaggcggagcgtaagtcc
gagcgcaaggcggattccaaggctgagaagccagagcagaagcagacctacgaagaggct
gtcgctgaatttgaggcctctccacgccgcaagcgcaagactcgtggcaactcccgctcg
gaccaccgtccgcagcgcagcgacttcgaggacgcgccacagcagcaggctgaggacgta
gcggcggagaagcaagagaagcgcaccgaaatgcaggtgcagcgcaccagccgcaagcgt
cgtcgtgccgtgcgccgtacgaccaagccgaagatggaggcggcaaaggtcgaggcttcg
cagcaagatgcgaagcaagaagacacgaagccgaaggccgacaagcggcagtctgacaag
aaggagaccggcaagccgaaggtgaccgtgcggaactcgcatgggcgtcgtcgtgcggtg
cgcaagacggtgcgtcgtaaggcagacagccacgatgccgcgccaaagcagcaggtcaag
cagcagtctgcggaggctgagcagaaacctaaggccgatgcgaagtcctctggaagcaag
ccttcccgcggacgcgggcgtcgtcgagtgacacgccggggacggaaataa
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