Corynebacterium crudilactis: ccrud_02555
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Entry
ccrud_02555 CDS
T04829
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ccjz
Corynebacterium crudilactis
Pathway
ccjz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccjz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ccrud_02555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccjz03021
]
ccrud_02555
03400 DNA repair and recombination proteins [BR:
ccjz03400
]
ccrud_02555
Enzymes [BR:
ccjz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ccrud_02555
Transcription machinery [BR:
ccjz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ccrud_02555
DNA repair and recombination proteins [BR:
ccjz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ccrud_02555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF496
Motif
Other DBs
NCBI-ProteinID:
ANE03197
UniProt:
A0A172QR72
LinkDB
All DBs
Position
538896..542897
Genome browser
AA seq
1333 aa
AA seq
DB search
MLDVNVFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLDLIIYFGANIITSVDDEARHSDQTTLEAEMLLEKKDVEADAESDIADRAEKLEED
LAELEAAGAKADARRKVQAAADKEMQHIRERAQREIDRLDEVWQTFIKLAPKQMIRDEKL
YDELIDRYEDYFTGGMGAESIEALIHNFDLDAEAEELRDIINNGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLNAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIEL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLRLHECGLPKLMALELFKPFVMKRLVENEYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYYLTLEKSAEEFGGQ
GAYAPADENGPEKGIYSSLAEAIMAYDRGVLGLQAIVRIRLNHLRPPAEVEAAQFPDGWN
QGETWLAHTSLGRVMFNEILPWNYPYLEGVMVRKGGGSDKIMLGDVVNDLAAKYPMITVA
QTMDKMKDAGFYWSTRSGVTIAMSDVLVLPNKEEMLDRYEESARQIEVKYNRGKLTGRER
YDRLVELWKDATDEVGQAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKGD
YITRPIKTSFREGLTVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRVED
CGTRQGVRVPVAAEILDATGAVTGYTGHDLIETSVSGRVLAGDATNAAGEVLLTAGTDLT
ELNIELLVEAGVKDVKVRSVLTCQTPTGVCAKCYGKSMASGQQVDIGEAVGIVAAQSIGE
PGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNCAPIASVEGVIHLEDEGNFYTLT
IVPDDGSDNVVYEKLSKRQGLASTRVAMESNAGAFIERTLTEGDRVTVGQRLLRGAADPH
DVLEILGRRGVEQHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPGS
LVDLSEAKLANSEAIGAGGQPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAIN
KRSDKLIGLKENVIIGKLIPAGTGISRYRNISIKPTEAARNAAYSIPTYGESIYGDDGFG
EFTGASVPLDEAF
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtaaacgtcttcgatgagctccgcatcggcctggccactgctgacgacatt
cgtcgttggtcaaagggcgaggttaagaagccggagaccatcaactaccgaaccctcaag
cctgagaaggacggtctgttctgcgagcgtattttcggtccaactcgcgactgggagtgc
gcctgcggtaagtacaagcgtgtccgctacaagggcatcatctgtgaacgctgtggcgtt
gaggtcaccaagtccaaggtgcgtcgtgagcgcatgggacacattgaactcgctgcacca
gtaacccacatttggtacttcaagggtgttccatcccgtctgggttaccttttggacctt
gctccaaaagacctcgacctcatcatctacttcggtgcaaacatcatcaccagtgttgat
gacgaagctcgccacagcgaccagacaactctcgaggcagaaatgcttctggagaagaag
gacgttgaggcagatgcagagtctgatatcgctgatcgtgctgagaagctcgaagaggat
ctcgctgaactcgaagcagctggcgctaaggccgatgctcgccgcaaggttcaggctgca
gccgataaggaaatgcagcacatccgtgagcgtgcacagcgcgaaatcgatcgtctagat
gaggtctggcagaccttcatcaagcttgctccaaagcagatgatccgcgatgagaagctc
tacgatgaactgatcgaccgctacgaggattacttcactggtggtatgggtgcagagtcc
atcgaggctttgatccacaacttcgacctcgatgcagaggctgaagaactgcgcgacatc
atcaacaatggcaagggccagaagaagatgcgtgcgctgaagcgcctgaaggttgttgca
gccttccagcgttccggcaacgatccagccggcatggttctgaatgcgatcccagtgatc
ccaccagagcttcgcccaatggttcagcttgacggtggacgcttcgcgacctccgacttg
aacgacctctaccgtcgtgtaatcaaccgcaacaaccgcctcaagcgcatgattgaactc
ggtgcacctgagatcatcgtgaacaacgaaaagcgcatgctgcaggaatctgtagatgca
ctgttcgataacggtcgtcgcggtcgcccagttaccggaccgggtaaccgtccgctgaag
tctctctccgacttgctcaagggcaagcagggtcgtttccgtcagaaccttctgggtaag
cgtgttgactattctggtcgttccgtaattatcgttggtcctcagctgcgcctccacgaa
tgtggtctgcctaagctgatggctctcgagctcttcaagcctttcgttatgaagcgcctt
gtggagaacgagtacgcacagaacatcaagtctgcaaagcgcatggttgagcgccagcgc
cctgaggtgtgggacgtcctcgaagaggccatctctgagcacccagtgatgctgaaccgt
gcaccaaccctgcaccgcttgggcattcaggctttcgagcctgtccttgttgaaggtaag
gctattcagctgcacccactggcttgtgaagctttcaacgccgacttcgatggtgaccag
atggcagttcacctgccactgtccgctgaagctcaggctgaagcccgcgtgctgatgctt
gcatccaacaacattttgtccccagcttcaggcaagccattggctatgccacgtctggac
atggttactggcctgtactacctaactctggagaagtctgcagaagagttcggcggacag
ggcgcttatgctcctgcggatgagaatggtcctgaaaagggcatttactcctccttggca
gaagcaatcatggcttatgaccgcggtgtacttggcctgcaggctatagtgcgcattcgc
ctcaaccaccttcgcccaccagcagaggtagaggcagcgcagttcccagacggatggaac
cagggtgaaacctggctcgcacacaccagcttgggccgcgttatgttcaacgagatcctg
ccttggaactacccataccttgagggcgtcatggtccgtaagggtggcggctccgacaag
atcatgcttggcgatgtggttaatgacctcgcagctaagtacccaatgatcactgtggct
cagaccatggacaagatgaaggacgctggcttctactggtcaacccgttccggcgtcacc
attgctatgtctgacgttctggttcttcctaacaaggaagaaatgctggaccgctacgag
gaatctgcacgccagatcgaagttaagtacaaccgcggtaagctcaccggtcgtgaacgc
tacgatcgtctggtcgaactgtggaaggacgcaaccgacgaggttggacaggctgtcgag
gatctgtacccagacgacaacccaattccaatgatcgtgaagtccggtgctgccggtaac
atgcgtcagatctggacccttgcaggcatgaagggcatggttgtgaactcgaagggtgat
tacatcacccgtccgattaagacttcattccgtgaaggcttgaccgttctcgagtacttc
aacaactcacacggttcccgtaagggacttgccgataccgcgcttcgtaccgctgactcc
ggctacctgacccgtcgtcttgtcgacgtcgctcaggacgtcatcgtccgcgtcgaggat
tgtggaacccgccagggtgttcgcgttcctgttgcagctgaaatcttggatgcaactggc
gctgtcaccggttacaccggccatgacctgatcgagacttctgtctctggtcgtgttctg
gctggcgatgcaaccaacgctgcaggagaagttcttctcaccgctggcaccgacctgacc
gagctcaacattgagcttctggttgaggctggcgtcaaggatgtcaaggtccgctccgta
cttacttgccagaccccaactggtgtttgtgctaagtgctacggcaagtccatggcttcc
ggacagcaggttgatatcggagaggctgtcggcattgttgctgcacagtccattggtgag
cctggtacccagctgaccatgcgtaccttccaccaaggtggtgtcggtggcgatattacc
ggcggtctgcctcgtgttcaggagcttttcgaagcacgtgttcctaagaactgtgctcca
atcgcttctgttgaaggcgttatccaccttgaggatgaaggcaacttctacactctgacc
atcgttcctgatgatggctcagacaacgttgtctacgagaagctgtccaagcgacagggt
cttgcatccactcgcgtggctatggagtccaacgctggtgcgttcatcgagcgcaccctg
accgaaggtgaccgcgtcaccgttggccagcgtctgctccgcggtgcagctgatccacat
gacgtgctcgagatcctcggccgccgtggtgtggaacagcacctcatcgatgaggtgcag
gctgtttaccgtgcacagggtgtggccatccacgataagcacatcgaaatcatcattcga
cagatgcttcgtcgcggaaccgtcattgagtccggttcaactgagttccttccaggttct
ttggttgacctctctgaggcgaagctggctaactccgaagctatcggtgcaggcggacag
cctgcagagttgcgctctgagatcatgggtatcaccaaggcctcgcttgcaactgagtct
tggctgtctgcagcgtccttccaggagaccactcgtgtcctgactgatgctgccatcaac
aagcgctccgataagctcatcggcctgaaggagaacgtgatcatcggtaagctgatccca
gctggtaccggtatctctcgttaccgcaacatctccatcaagccaactgaggctgcccgc
aacgctgcgtactcgatcccaacttatggtgagtcgatctacggtgacgatggattcggt
gaattcaccggcgcgtccgtcccactggatgaagcattctag
DBGET
integrated database retrieval system
