Corynebacterium crudilactis: ccrud_03780
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Entry
ccrud_03780 CDS
T04829
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccjz
Corynebacterium crudilactis
Pathway
ccjz03420
Nucleotide excision repair
ccjz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccjz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ccrud_03780
03430 Mismatch repair
ccrud_03780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccjz03400
]
ccrud_03780
Enzymes [BR:
ccjz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ccrud_03780
DNA repair and recombination proteins [BR:
ccjz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ccrud_03780
MMR (mismatch excision repair)
Other MMR factors
ccrud_03780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ANE03426
UniProt:
A0A172QRW1
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All DBs
Position
793103..796315
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AA seq
1070 aa
AA seq
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MPKISPRLLSQYLGQEHAPTEQQAAIIGSQPGPLLVVAGAGAGKTETMAARVVWLVANGF
VAPDQVLGLTFTRKAAQQLSQRIRQRLETLAGVPRLKDIDPTGKLEHNLQAITPTVSTYD
SYAGTLIREYGLLLPVEPSARLITQTELYHIARSVVNNYEGELTATQTPATVTEYLLKLV
SEMDNHMVSAEDIREESDPFIQLFDELPKGKGQRDNLNAEMTKWRDTQIARLQYLPLVQA
LKEELHHQSVVTFGEQMSKAAKLTSTHPQVGYSQRRRFRVVMLDEYQDTSHSQRVLLSSL
FGGIDPGLTVNAVGDPMQAIYGWRGATAANLENFVDDFPLINLDGKTRAPKNELTTSWRN
PPEVLTLANAISREVLGSPDSPTRTVQPLQPREGAPTGEVSLGWFGTAAEERTFVADTME
RHWKAREEAGKFTAAVLVRKKRHSAPMAEELTKRGIPVEIVGLSGLLDIPEIADLISLAT
MLVRPQDNRAALRILAGPHVGLSVADLERLQRRARNIAGRVSRGHRDRYEDPMTELDAII
EEATAIEPEAVVGLADAVSDLGEGDRFSEEGLSRLRRLAGQLRYLRKYSLGRSVADIFAD
IETVFNIRTEVLARQNPYDDGAVGTVHLDKFAEEVASHGGIGLPELLDYFELAREQEEGL
EPGEVTVRSDRVQILTVHKAKGLEWDIVSVLHADASTYDAKASTWLKNVTMIPSSLRGDA
GTGAPELDTSGAEDRKALEDAGKEYTNEVREGLKEENSRLFYVGITRSERVLMVTGSAFD
ESGTKAKDPYGHLEILRDKAPESVVAWWEGEEGDVEKQKPAEGIFPQLSSADRSGADLVR
GPRAEANNEGGLESLWEKEVSALIDEHRRLSNPTLEVEISRELTATDLVSMKNNPEQFAR
RMRRPVPFKPNTYAKRGTMFHQWLEDRFGKTALLDEFELPGIDEDYSDDAFIELRDAFLG
SDWENRTPEFVEHPFEVTIGEHVIRGRMDAVFRTDGTWMVIDWKTGRTPTGPEMNAAIIQ
LAVYRLAWARLQNLNPTEVRAAFHYVAHDHTFEPTDLPTQEELARLLSQE
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagatttctcctcgcctcctctctcaatatttggggcaagagcatgcaccgact
gagcaacaggcagcgatcatcggatcacaacctggtccgcttcttgttgttgcgggtgcc
ggtgcgggtaaaactgaaacgatggctgctcgtgtggtgtggcttgtcgcaaacggattt
gtggcgcccgatcaggtgctgggcctgacctttacccgaaaagctgcgcagcagctatca
cagcgtatccgccaacgtttggaaacactcgctggtgtgccgaggctgaaagatattgat
ccgaccggaaaactagagcacaatctccaagcaattactcccacagtgtccacctatgac
tcttatgcaggcaccctaattagagaatacggattgctgcttcctgtagagccttctgcg
cgattgattacgcagactgagctttatcatatcgccagaagcgtggtgaacaattacgaa
ggagagctcaccgctacgcaaactcctgcgacagtaacggaatacctgctcaaattggtc
tccgaaatggataatcacatggtcagtgccgaggatatccgcgaggaatcggatccgttc
attcagcttttcgacgagctccccaagggcaagggacaacgcgataacctcaatgccgaa
atgacaaagtggcgggatactcagatcgctcgtctccagtacttgccacttgtgcaggcg
ttgaaagaggaattacatcatcaatcggtggtgactttcggtgagcagatgtctaaggcc
gcgaagcttacatcgacgcatcctcaagtgggctattcgcaaagacgcaggttccgcgtc
gtgatgcttgatgagtaccaagacacaagccactcgcagcgcgtgttgttgagcagtctt
tttggagggatcgatcccggattaacagtgaatgctgtcggcgatccaatgcaagcgatt
tatggatggcgcggagcaaccgctgcgaacttggagaattttgtcgatgatttccctctc
attaaccttgatggcaaaactcgtgcgccgaaaaatgagctgaccacaagttggcgaaat
ccgcccgaggtactaacccttgccaacgccatctcgcgcgaagtacttggatcgccagat
tcgccgacccgaactgtgcaaccgctgcagcctcgtgaaggtgccccaactggagaggtt
tctcttgggtggtttggtacagcagctgaggaacgtacctttgtcgctgacactatggag
aggcattggaaagctcgtgaggaagccgggaagtttactgctgcggtattggtgcgtaag
aagcgacattctgcgccgatggcagaagagctgactaagcgcggtattccggtagagatc
gtcggtttatccggattgttggatattcctgagattgcggatctgatttctctagcaacc
atgctggtgcggcctcaggataatagggctgcattgcgtattttggcggggcctcatgtg
gggttgagcgttgcggatttggagcgcttgcaaagacgtgcgcgaaatattgctggccgt
gtgtcgagaggccaccgtgatagatatgaagatccgatgactgagttggatgcgattatt
gaagaagctactgcgattgaacctgaagctgtggttggtttggctgatgcggtatcggat
ttgggtgaaggcgatcgcttcagtgaggagggcttgagccgtttgagacgattggccggt
cagttgaggtatttgcgcaaatatagtttgggccgatcggtggcagatatttttgctgat
attgagacggtgtttaatatccgtactgaggtgttggctcggcagaatccttatgacgat
ggtgccgtgggtacggtgcatttggataaattcgctgaagaggtggcaagccatggtggt
attggattgccggagctcttggattattttgagctcgccagagaacaagaggaaggactg
gagccaggcgaggtgacggtgcgcagcgatcgcgtccagatcttgactgtccacaaggcg
aagggtttggaatgggacattgtgtcggtgctccatgccgatgcgtcgacttatgatgcg
aaggcttcgacgtggctgaaaaatgtcacgatgatcccctcgtctcttcgcggcgatgcg
ggtaccggtgcgccagagttggatacctctggggcggaggatcgtaaagctctagaagat
gctggcaaggagtacaccaatgaggtgcgcgagggattgaaagaggagaactctcggctg
ttttatgtcggcatcacccgcagcgaacgtgtgctgatggttaccggatcggcgtttgat
gaaagcggcaccaaagcaaaagacccctatggtcatttggagattttgcgggataaagca
cccgagtctgttgtggcgtggtgggaaggtgaagagggagacgtcgagaagcagaaacct
gcggaaggcatcttcccgcagctgagctcggcagaccgttccggtgcggatctggtgcgc
ggcccgcgcgcggaagcaaacaacgagggcgggctggaaagcctgtgggaaaaagaggtc
agcgcgcttatcgacgagcaccgccgcctgtccaaccccaccttggaggtggaaatttcc
cgcgagctcaccgcgactgatctggtgtctatgaaaaacaacccagaacaattcgcacga
cggatgcgtcgcccggtaccgtttaaacccaacacctacgcaaaacgcggaacgatgttc
caccaatggctcgaagaccgcttcggaaaaactgcgctactcgacgaatttgagctcccc
ggcatcgacgaggactactcagacgatgcgttcatcgaactccgcgatgcgttcttaggc
tccgattgggaaaaccgcacaccagaatttgtggagcacccttttgaagtcaccatcggc
gaacacgtgatccgcggaagaatggacgccgttttccgcaccgatggcacctggatggtc
atcgactggaaaaccggccgcaccccaaccgggccagaaatgaacgcagcgatcattcag
ctcgccgtctaccgactcgcctgggctaggctgcaaaacctcaaccccacagaagtacgt
gcagctttccactacgtcgcacacgaccacacctttgagccgaccgatctgccgactcaa
gaagaactggcccggctgctgagtcaggaataa
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