Corynebacterium crudilactis: ccrud_05785
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Entry
ccrud_05785 CDS
T04829
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ccjz
Corynebacterium crudilactis
Pathway
ccjz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccjz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ccrud_05785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccjz03021
]
ccrud_05785
03019 Messenger RNA biogenesis [BR:
ccjz03019
]
ccrud_05785
Transcription machinery [BR:
ccjz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ccrud_05785
Messenger RNA biogenesis [BR:
ccjz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ccrud_05785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
AAA_22
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ANE03769
UniProt:
A0A172QST8
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All DBs
Position
1223999..1226287
Genome browser
AA seq
762 aa
AA seq
DB search
MTTTDNTAANQGELTALRLPDLRKIAADLGLKGTSALRKGDLISAISAARSGKPTAAAKN
TSPRKAAPASAAQPSAPVEPAQAAPAQTSAVPVSASQTEAPAAPARRGRRRVTTAATTPE
AAAPAQSVPSQQSETPAAAPEAAPAQEAPQGDDQDDRFESRSAARRARRNRQRQIHRDGD
GQATENVEATQIPASAEAVAEKPAEQASTPVEAAERSQDNSQDSSDNSTETREYNGDNNR
HNNRRERGNRRNNRNYRDNRENRENNDSTENAAQVSTVDSDNNAENNTAQSEDNNDDRRS
RYDRNDRNNRNTRNNDRNDRDNDNNDDNDDRRGRRGRRNRRGRNDRDQQDNRNNRDNQDH
NEGENTTSHEDQLQPVAGILDIVDHNVAFVRTTGYHAAPSDVFVSNQLIRRMGLRSGDAI
EGQIRMNQGGGNHNNHGRNRQKYNNLVRVEVVNGLPAAETRNRPEFGKLTPLYPNQRLRL
ETEQRILTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIANAISTNNPECYLMVVLVD
ERPEEVTDMQRSVRGEVISSTFDRPPSEHTAVAELAIERAKRLVEQGQDVVVLLDSITRL
GRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTV
IFEEFKGTGNAELKLDRKISERRVFPAVDVNPSGTRKDELLLNPDEARIMHKLRRILSAL
DNQQAIDLLLKQLKKTKSNAEFLMQVASSAPMAGADKEEDYS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaccacagacaacaccgcagcgaatcagggcgaactgaccgctcttcgactgccg
gatctgcgcaaaattgctgctgaccttggactcaagggcacttcagcattgcgtaaaggc
gatctgatcagcgctatttctgcagcccgttccgggaaacctaccgccgctgcgaaaaac
acttctccacgaaaggctgctcctgcatctgcagcacagccttctgcaccggttgagcca
gcacaggctgctcccgcacaaacttccgctgttccggtttctgcatcacagacggaagct
cccgcagcaccagctcgccgtggtcgtcgccgtgtgaccactgctgcaaccactcctgaa
gctgctgcacccgcgcagtcagtaccaagccagcagtcagagactcctgctgcagctcca
gaggcagcacctgcacaagaagcacctcagggcgatgatcaggatgatcgcttcgagtct
cgttccgcagctcgtcgcgcacgccgtaaccgccagcgccagatccaccgcgatggcgat
ggtcaagcaactgagaacgtagaagcaacacagattccagcttctgctgaggctgttgct
gaaaagccagctgagcaggcttccacaccagtagaagcagcagagcgcagtcaggacaac
tctcaggattcaagcgataacagcactgaaacccgtgagtacaatggcgacaacaaccgc
cataacaaccgccgtgagcggggcaaccgtcgcaacaaccgtaattaccgcgacaatcgt
gaaaatcgtgagaacaacgattccaccgaaaacgctgctcaggtaagcactgttgattca
gataacaatgcagaaaataacactgcacagtctgaagacaacaatgacgatcgtcgttca
cgctatgaccgtaacgatcgcaacaaccgcaacacccggaacaacgatcgcaacgatcgt
gacaacgacaacaatgacgataacgatgatcgtcgtggacgccgtggtcgccgtaaccgt
cgtggacgcaatgatcgtgatcagcaggataaccgcaacaatcgcgataaccaggaccac
aatgagggcgaaaacaccacctcacatgaggatcagctgcagcctgtagcgggcatccta
gacatcgtggaccacaacgtcgcatttgtgcgcaccactggttaccacgcggcaccttct
gacgtctttgtcagcaaccagctgattcgtcgcatgggtcttcgttccggagacgctatt
gaaggtcagatccgtatgaaccagggtggtggcaaccacaacaaccatggtcgcaaccgc
cagaagtacaacaacctggtgcgcgtggaagtagtcaacggacttccagctgcggaaacc
cgcaaccgtcctgagttcggcaagctgactcctctgtacccgaaccagcgtctgcgtttg
gaaactgagcagcgcattttaaccacccgcgtcattgacttgatcatgcctattggtaag
ggccagcgcgcgctgatcgtttccccaccaaaggccggcaagaccaccatcttgcaaaac
attgccaatgcaatctccaccaataacccagagtgctacctcatggttgtcttggttgac
gagcgtccagaagaagtgaccgatatgcagcgctccgtgcgtggcgaggttatttcctct
acctttgaccgtccaccatcagagcacactgcagtggcagagctggcgattgagcgtgca
aagcgcctggtagagcaggggcaagacgttgttgtcctgcttgactccatcactcgtttg
ggccgtgcttataacaacagctcaccagcatcgggacgtattctttccggtggtgtggat
tccaatgcgctttaccctccaaagcgtttcttgggtgctgctcgcaatatcgaaaacggt
ggttctttgaccatcatcgcaaccgcaatggtagaaaccggttctgctggcgataccgtg
atcttcgaagagttcaagggcactggcaacgcggagctgaagctggatcgtaagatctct
gagcgtcgtgtattcccagctgtggatgtgaatccttccggcacgcgtaaggatgagctg
ctgcttaaccctgacgaagctcgcatcatgcataagctgcgtcgtattctgtccgcactt
gataaccagcaggctattgatctgttgctcaagcagctgaagaagaccaagtccaatgca
gagttcctcatgcaggttgcgtctagcgcgccaatggctggggctgacaaagaagaggat
tactcctaa
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