Corynebacterium crudilactis: ccrud_06320
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Entry
ccrud_06320 CDS
T04829
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccjz
Corynebacterium crudilactis
Pathway
ccjz03420
Nucleotide excision repair
ccjz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccjz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ccrud_06320
03430 Mismatch repair
ccrud_06320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccjz03400
]
ccrud_06320
Enzymes [BR:
ccjz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ccrud_06320
DNA repair and recombination proteins [BR:
ccjz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ccrud_06320
MMR (mismatch excision repair)
Other MMR factors
ccrud_06320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_30
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ANE03863
UniProt:
A0A172QT39
LinkDB
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Position
1336572..1338494
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AA seq
640 aa
AA seq
DB search
MSRFKIFNAPAGSGKSTEIKARVREWSDQFPRDHMLCVTYTNRAADELKAGISADNVDVS
TIHSFLAEFMEPMFVLPEIVDLYLEVYRKDIENRIANQENWPHIEKSNAKYREKLGEPLT
FKLIGESIKTLHYNEMQFNSPLAGGLSHNDLLSFAAICAESFPALRKRISSKYQQIIIDE
YQDTSAGVLEFFVDAVSESETSLHLYGDPMQQIYQLSSDRLRSILDRFEADKRTIINYRS
SSAIVKSLNRIYNDPSLEQEADDKVKSSLPRIHLTNSPLEMVNDIADEETLVLSVRNMTI
FDNIGATALFKAFDSMPDHNYSSRYRALDVLMEPRWLEVKNSLLQLMFGILYLEDSYKKF
EYGEIIQALRKHSSIFGFLSIQNHSDKGRLRQELEDLFEFVGSDEVTIRQVILYLVSAGH
LKASIAGEYLENEDYYPVLEVPYLQVRKMYLFNQRPNWSTQHGVKGESHNRVIFLAENST
GTPSVHIDKLFNLWSVIPFNLHMLEETYVKISAQFEQSREKAADYFDNPRKSSYDKNADV
IITEARSIVATYSHLPLFKLLYGEVFDTYFNKLNTSSASKLFKVSAIEGLLTAYRLFYVG
CSRARQNLDVIVNAEKIVDSQAFSRKFENLGFEVISHNDL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggtttaagatattcaacgcacccgctggtagtggaaagagtactgagatcaaa
gcccgggtgcgtgaatggtctgatcaatttcctcgagatcatatgctgtgtgtaacctac
accaaccgcgcagcagatgaactcaaggcaggaatcagcgctgacaatgtcgatgtttca
accattcactccttcttggcagaattcatggagcctatgttcgtgctacctgaaattgtc
gatctgtaccttgaagtttacagaaaagatatcgaaaatcggattgcgaaccaggagaat
tggcctcatatcgaaaaaagcaacgcaaaatatagagagaagcttggggagccactaaca
ttcaaactaatcggcgaatcgatcaaaactcttcactataatgagatgcagtttaactcg
ccgctcgcaggcggtttatctcataatgatctgctttcgttcgccgctatttgtgcggag
agctttccagcattgcgaaagcggatcagttcaaaataccagcaaataatcatcgatgaa
tatcaagatacaagcgcgggcgtcttggagttcttcgtggatgcagttagcgaatcagag
acatctttacatctctatggtgatcctatgcagcagatctatcaactgagttcggatcgc
cttaggtctatccttgatcggtttgaggcggataagcgaaccatcatcaactacaggtcg
tcatctgcgattgttaaatctctaaatcggatatataacgacccatccctcgagcaagaa
gccgacgacaaggtaaagtcttctttaccaagaatccacttgactaacagtcctctggag
atggtaaatgatatcgcagacgaggaaaccctagtgctgagtgtccggaatatgacgata
tttgacaatataggggcgacagccctttttaaagcgttcgattcaatgcctgaccataac
tatagctctaggtaccgcgcactggatgttctcatggagccgcgttggcttgaagtaaaa
aattcgctcttgcaattgatgttcgggattctctacctcgaagactcctacaagaaattt
gagtatggcgaaatcatccaggcgttgaggaaacattcttccatattcggttttctctcc
atacagaatcattctgataaaggtagattgaggcaagagctggaagacttatttgagttc
gttggttccgatgaagtaacgatacgtcaggtcatactatacctagtttcagcgggtcat
ttaaaagcttcgatcgcgggggagtacctagaaaatgaggattattaccctgttcttgaa
gttccatacctgcaagtgcgaaaaatgtatctgttcaaccaacgtccgaactggtccacc
cagcatggcgttaagggtgaaagccataacagagttattttcctggcagaaaacagtacc
ggaacaccctctgtccatatcgataaactcttcaatctttggtcagtaattcccttcaac
ctccacatgctagaagagacttacgtgaaaatttcggcacagttcgaacaatctcgcgaa
aaggctgccgattatttcgataatcctcgtaagagttcttacgataaaaacgcagatgtg
atcattactgaagcgaggtcaattgtagcgacttactctcatttgcccttatttaagttg
ctttacggtgaggtttttgacacctattttaataagttaaatacaagttctgcatcaaag
ctttttaaagtttcggctatagaaggattgctaacggcctatcgccttttttatgtaggt
tgttcacgagcgagacaaaatctggatgtaattgttaatgccgagaaaatcgtcgacagt
caggcattctctcgcaagttcgaaaaccttgggtttgaagttatatcccataatgattta
tag
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