Corynebacterium crudilactis: ccrud_08185
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Entry
ccrud_08185 CDS
T04829
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ccjz
Corynebacterium crudilactis
Brite
KEGG Orthology (KO) [BR:
ccjz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccjz03016
]
ccrud_08185
Enzymes [BR:
ccjz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ccrud_08185
Transfer RNA biogenesis [BR:
ccjz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ccrud_08185
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ANE04182
UniProt:
A0A172QU07
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Position
1738742..1739953
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AA seq
403 aa
AA seq
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MVSDLLQPRDGIPSLLSTPGEFAAAADLLASGTGPFAIDTERASGFRYDDRAFLIQIRRR
GSGTLLFDPEQFRPELTQALKPVLNGQEWIIHAASTDLPSLAWLDLHPGLLFDTELAGRL
AGFDHVNLASMVEQIFELHLLKGHGSEDWSKRPLPESWLNYAALDVEMLLELADVMAELL
DQQGKLRWAEQEFEHIITQFADVTEPAQTSWQDLKGLSTLKRPEQLVAAREMWLERDAFA
ASRDLAPGKVLSNKVIVEVARVLPRTPAALAQVKGFPGKSQGATQRWFRILTRALKSPRK
NWPKPQRRKDGIPDRRAWSSFYPEEHEVLQELRALIDDLGADLNVPGENILQPSTLRVVV
WMAKHTGDIHNAETLNAVLHDYGARPWQIEQTFPILAKALLKI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgatcttcttcaaccccgcgacggtattccgtcattgctatcgactcccggt
gagtttgctgctgctgcagatctcttagcaagcggaactggccccttcgctattgatacg
gagcgcgcgtccggttttagatacgatgaccgggcatttttgattcagattcgacgtcgt
ggcagcggtactcttcttttcgatccggagcagtttcgccctgaattaactcaggcactc
aaacctgtactcaatggccaagagtggattattcacgcagccagcaccgatttgccaagc
cttgcgtggctcgatcttcaccccgggttgctctttgataccgagcttgccggcagacta
gctggatttgatcacgtcaacctggcctccatggtggaacaaatctttgaactccacttg
ctcaaaggccacggatctgaagattggtccaagcgtccgctgcctgaatcctggctcaac
tacgccgcactcgatgtggaaatgctccttgagcttgccgatgtcatggctgagctcctt
gatcagcagggaaaacttcgctgggcggagcaagaatttgaacatatcatcactcaattt
gccgatgtgacagaacctgcacagacttcctggcaagacctcaaaggtttatccactctc
aagcgaccagaacaattggtggcagctcgagaaatgtggttggaacgggatgctttcgcc
gcgtctcgtgacttggcacccggaaaagtactgtccaacaaagtcattgtggaagtcgcc
cgtgtcctcccccgcaccccagcagcactggctcaagtcaaaggcttccctggaaaatct
caaggtgccacgcagcgctggttccgcattctcacgcgcgccctcaaatcacctcgcaaa
aactggccaaagccccagcgacgcaaagacggcatcccggaccgccgcgcctggagctcc
ttctacccagaagagcacgaagtgctccaagagcttagagcgcttatcgacgacctcggc
gccgacctcaacgttcccggcgagaatatcctgcagccttcaactctgcgagtagttgtc
tggatggcgaaacataccggtgacatccataatgctgaaacgctcaatgctgtgctgcat
gattatggagccaggccatggcagattgaacaaacgttcccgatcttggctaaagcgctg
ctgaaaatctaa
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