Corynebacterium crudilactis: ccrud_13555
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Entry
ccrud_13555 CDS
T04829
Name
(GenBank) DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ccjz
Corynebacterium crudilactis
Pathway
ccjz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccjz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ccrud_13555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccjz03400
]
ccrud_13555
Enzymes [BR:
ccjz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ccrud_13555
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ccrud_13555
DNA repair and recombination proteins [BR:
ccjz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ccrud_13555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ANE05123
UniProt:
A0A172QWN8
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All DBs
Position
2950758..2951567
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AA seq
269 aa
AA seq
DB search
MPEGHVIHRLARDLNKNFGGADLEATSPQGRFAAEAALINGHRITVAEAFGKHLFVEFDS
DNPEHILYIHLGLIGTFHFEPAEETRGQIRLHLSDGDIAANLRGPQWCRLITDAERTVAI
GKLGADPIRDDADPEPIRIKVQRSGRSIGSLLMDQKLFAGVGNIYRAETLFRLGISPFAI
GKDITTAQFQAIWADLVVLMKDGVVAGRIDTVRHEHTPEAMGRQPRKDDHGGEVYTYRRT
GQECFLCDTPIKEQVMEGRNLFWCPSCQS
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggacatgtgattcatcgattagctagggaccttaataagaactttggtggt
gccgatttagaggccacgtcaccgcaaggacgttttgctgctgaagctgcgcttattaat
ggtcatcgcatcacggttgcggaagcctttggcaagcaccttttcgtggaattcgactca
gataatccagaacacattctctatatccacttaggcctcatcggcacattccactttgaa
cctgcagaagagactcgtggtcagatcaggctgcacctctctgatggagacatcgcagct
aacctgcgtggaccccagtggtgtcggttgatcaccgatgctgagcgcactgtagccatt
gggaaactaggtgcggatcccattcgtgatgatgcggatccagaaccaatacgcatcaaa
gtgcaacgctctggccgcagcatcggatcgttgttgatggatcaaaaactctttgcggga
gtgggcaatatttaccgtgcagaaacactcttccgtctcggtatctcaccttttgctatt
ggaaaagacatcaccaccgcacaattccaggccatttgggcagatcttgtcgttttgatg
aaagacggagtcgttgccggtcgtattgatactgtgcgccacgaacacactcccgaagcc
atgggccggcaacctcgtaaagatgaccacggcggtgaggtttatacctaccgacgcact
ggccaagagtgtttcttatgtgacactcccatcaaggagcaagtgatggaaggccgcaac
ctgttttggtgcccgagctgccagagctag
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