Clostridium carboxidivorans: Ccar_00805
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Entry
Ccar_00805 CDS
T03979
Name
(GenBank) AP endonuclease
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
cck
Clostridium carboxidivorans
Pathway
cck03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ccar_00805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cck03400
]
Ccar_00805
Enzymes [BR:
cck01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Ccar_00805
DNA repair and recombination proteins [BR:
cck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Ccar_00805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AKN29453
UniProt:
C6PQY9
LinkDB
All DBs
Position
complement(154196..155014)
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AA seq
272 aa
AA seq
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MEKLLFGISGTPIGDGSKKFNYESSIIYLKSIGLDAMELPFVRSVNVTDKNRDKILKAKI
DNDFYLSAHGSYYINLNADEKEKQEQSMERIVKGAQGLLKVEGRSLIFHPGFYLKDSKEE
TLNTIKNNLTKLPYLGVDYRLETTGKGTQFGDLKELVSLCKEINHCKLCIDFSHIHARFN
GILKDYEGFESILKYIEDELGRNALEDIHIHLSGINYTAKGERNHLPLQESDFNYAACLR
ALKKFDVKGCIICESPILEKDALLLKETYNSL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggagaaattgttatttggtatatctggtacacctattggcgatggaagtaaaaaattt
aattatgaatcaagcataatttatttaaaatctataggtttagatgcaatggaactgcct
tttgtacgctctgtaaatgttacagataaaaatagagataaaatattaaaagcaaaaata
gataatgatttttatctttctgctcacggttcctattacataaatttaaatgctgatgaa
aaagaaaagcaagaacaatctatggaaagaatagttaaaggtgctcaaggtctattaaaa
gttgaaggtagaagtctaattttccatccaggtttctatttaaaggattcaaaggaagaa
acccttaataccataaaaaataatttaaccaagttgccttatttaggtgtggattataga
ttagaaactactggtaaaggcactcaatttggtgacttaaaagaattagtttctctatgt
aaagaaatcaatcactgcaaattgtgcatagatttttcacatattcatgctagatttaat
ggaattttgaaggactatgaaggttttgaatctattcttaaatacattgaagatgaatta
ggaagaaacgctttagaagatatccatatccatttatctggcataaattatactgcaaag
ggagaaagaaaccatcttccacttcaagaaagtgattttaattacgcagcttgcttaaga
gccttaaaaaaatttgacgtaaaaggctgtatcatatgtgaaagccctattttagaaaaa
gatgctcttctgcttaaagaaacatataatagtctgtaa
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