Clostridium carboxidivorans: Ccar_00910
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Entry
Ccar_00910 CDS
T03979
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cck
Clostridium carboxidivorans
Brite
KEGG Orthology (KO) [BR:
cck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cck03016
]
Ccar_00910 (truB)
Enzymes [BR:
cck01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Ccar_00910 (truB)
Transfer RNA biogenesis [BR:
cck03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Ccar_00910 (truB)
Prokaryotic type
Ccar_00910 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AKN29474
UniProt:
C6PQW7
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All DBs
Position
175150..176025
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AA seq
291 aa
AA seq
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MNGILNINKPLGMSSFDVVRKVKSIAKTKKVGHTGTLDPEASGVLPICIGNATKLVDYIM
SDYKIYKVELMLGITTDTYDREGKVIKNSPVDLEVEEVKKVIKEFEGNIDQIPPMYSALK
VNGQRLYSLARQGIEIERKPRSITIYSINIIDIQLPKVIFEVKCSKGTYIRSLCYDIGEK
LKCGGTMWNLQRTRTGSFNIESSVDLDKLNIENINEYLIPMERALEKYPAVYIDEKYEKL
VLNGVTLKNPMLIENIEMDILYRVYLGKEKFIGIGMKQNLGFKMIKLLIQR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaatattaaatattaataaacctttaggaatgagttcttttgatgtagtaaga
aaagtaaaatctattgccaaaactaaaaaagtgggtcacacaggtactttagatccagaa
gcttcaggggtacttcctatatgtataggaaatgctactaagcttgtagattatataatg
agtgattataaaatatataaagtagaattaatgttaggaattaccacagatacttatgac
agggaaggaaaagtaattaaaaattctcctgtggatttagaggttgaagaggttaaaaag
gttattaaagaatttgagggaaatatagatcaaattcctcctatgtattctgctttaaaa
gttaatggacaaagattgtattctttggccagacagggaatagaaatagaaagaaaacct
agaagtataactatatacagtataaatataatagatattcaactgcctaaagtgatattt
gaagtaaaatgttctaagggtacatacataagaagcttatgctatgatattggagaaaag
cttaagtgcggaggcactatgtggaatctgcaaagaactagaacaggaagttttaatata
gaaagttcagtggatttggataaattaaatatagaaaatattaatgaatatttaattcca
atggagagagctttagaaaaatatcctgcagtttacatagatgaaaaatatgaaaaactg
gtgcttaatggagttacattaaagaatcctatgttgattgaaaacatagaaatggatata
ttgtatagagtttatttgggaaaagaaaaatttattggcattggtatgaaacaaaattta
ggatttaaaatgataaaactattaattcagaggtaa
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