Clostridium carboxidivorans: Ccar_03275
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Entry
Ccar_03275 CDS
T03979
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cck
Clostridium carboxidivorans
Pathway
cck03420
Nucleotide excision repair
cck03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ccar_03275
03430 Mismatch repair
Ccar_03275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cck03400
]
Ccar_03275
Enzymes [BR:
cck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ccar_03275
DNA repair and recombination proteins [BR:
cck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ccar_03275
MMR (mismatch excision repair)
Other MMR factors
Ccar_03275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
RNase_T
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
DEDDh_C
DEAD
AAA_30
DNApol_Exo
AAA_11
ResIII
Soc
Motif
Other DBs
NCBI-ProteinID:
AKN29913
UniProt:
C6PML3
LinkDB
All DBs
Position
762141..764729
Genome browser
AA seq
862 aa
AA seq
DB search
MSMNEQQELLINELEKNVILLASAGTGKTETLSKRVANIIDKGKAEPSQILCITFTNKAC
KEIRERIEGIVGASAKDITVKTFHSFCFDVIKQEAKKGTDVFTDFTIFDEEDCRELVKYC
NYFDFSVSTLQKFIDTVKLTIAKNNIYSDDIMEDCSRAVSAVFKTNEDKINQICTEKGNL
NYRLKEILRDKGSIFVNSYNSLLYHNHGLDFADLIIKAKELFNNPEVVNSYINRYKYINI
DEVQDTSTLEYSIIEKLFKGNNVLICGDKFQTIYGWRGSEPNRIFKSFKENYDPKEIIFT
INYRATKNLTEASLKYLENAFPIDMKDTYKEGIQCESKDAGDKISLKIADNLREEARFIY
NEVINLERKNGSADNICVLTRDNRYNINLSEQLKSIMKPEAVNFEFILVDQFKFFRRQEI
KDVIAFLKLIANRYDSISLKRIVKRLPTGVGDKTFEAIESEKYKKLGISLSDFIDDNVFK
YGDKYSLLIDEFQKDNIIVFDVESTGVDVTEDEIIQIAAIKVNKNGQVTEKFERFLKNNK
SVKNSEHVHGFSDEFLKKNGEDKNTVLKEFVKFSEDSVIVGHNVQYDINILTSELQRAGL
GEPKFKAFYDTLDIYRRFHPNLRNHKLETLSHIFETENKPSHDAMDDIQATKDILVRAIK
DDIVPTSMERIACMSKYLKAFNNIADKLNNLFKEAEGSRPHDIVNKIVNGFSLKTLYTGD
EGKEKIERLRDFYVLLRELDNKNKNSRDSLLDIIRITSLSNGELESLVINRTKKPRIPII
TVHQAKGLEYETVFISGAQQNTFPSYMSIKSNNLEEEKRTFYVAMTRAKKQLYITCNTDG
RYKRTTKSEFIDLIPWSYISIV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgaatgagcagcaggagctgttgataaatgaacttgaaaaaaatgttatatta
cttgcatcagcaggtactggcaaaacagaaactttgtccaaaagagttgcaaatataatt
gacaaggggaaggctgagccttcacaaatattgtgtattacttttacaaataaagcctgt
aaggaaattagagagagaattgaaggcatagtaggtgcttcagcaaaagacattacagta
aaaacattccacagcttttgctttgatgtaattaagcaggaagctaaaaaaggaacagat
gtgtttactgactttacaatttttgatgaggaagattgtagagagcttgtaaaatactgt
aattattttgatttttcagtttcaacattgcaaaagtttattgacactgtaaaattgacc
attgcaaaaaataatatttatagtgatgatattatggaagattgcagtagggctgttagt
gctgtttttaaaacaaatgaggataagataaatcaaatatgtactgaaaaaggtaatttg
aattatagattaaaagaaatcttaagagataaaggaagtatttttgttaattcttataat
tccttactttaccataatcatggtcttgattttgcagatttaataattaaagctaaggaa
ttatttaataacccggaagtagttaattcctatataaatagatacaaatacataaatata
gatgaagttcaagatacaagcacgttggagtattccataatagaaaaattgttcaaagga
aataacgttctaatatgtggagataaatttcagacaatttatggttggagaggttccgag
cctaataggatatttaaaagctttaaggaaaattatgatccaaaagaaatcatattcact
ataaattacagagctacaaaaaatttaacagaagcttcactaaaatatcttgaaaatgcc
tttccaatagatatgaaggatacatataaagaaggtattcagtgcgaatcaaaggatgct
ggagataagatttcattaaagatagcagataatttaagagaagaggccagatttatatat
aatgaggtaataaatttagaaagaaaaaatggaagtgcagataatatatgtgtactcaca
agagataatagatataatataaatttaagtgaacaattaaaaagtattatgaaacctgaa
gctgtaaattttgaatttattttagtggatcaatttaaattttttagaagacaggaaata
aaggatgtaatagcttttttaaagctcattgcaaatagatatgattctatcagtttaaag
agaatagtgaagagacttccaacaggtgtaggagataaaacttttgaagctattgaatcg
gaaaaatataaaaagttaggtatatccttatcagattttatagatgacaatgtgttcaaa
tacggagataaatattcactgcttatagatgaatttcaaaaagacaatattatagtattt
gatgtggagagtacaggagttgatgtgactgaagatgagattattcaaattgcagctatt
aaggtaaataaaaatggacaagtaacagagaaatttgaaagatttcttaagaataataaa
tcagtcaagaattcagagcatgttcatggttttagtgatgaattcttaaagaaaaatgga
gaagataaaaatacagttttaaaagagtttgtcaagttttcagaggattcagtgatagtt
gggcataatgttcagtatgatatcaatatattgactagtgaacttcaaagagctggattg
ggtgaacctaaatttaaagctttttatgatacgctggatatttacagaagatttcatcct
aatttgcgaaaccataagcttgaaactttaagccatatatttgaaactgaaaataaacca
agtcatgatgcaatggatgatatacaggctacgaaggatattcttgtaagagccattaag
gatgatattgttcctacttcaatggagagaatagcttgtatgtcaaaatatttaaaggca
tttaacaatatagctgacaagttaaataacctttttaaagaagcagaaggaagcagacct
catgatattgtaaataaaattgtaaatggctttagtttaaaaactttatatactggtgat
gaaggcaaggaaaagattgaaaggcttagagatttttatgtacttttaagggagcttgac
aataaaaataaaaacagcagagattcattattggatattatcagaataacctctctttcc
aacggcgagctggagtcacttgttattaataggactaaaaagcctagaataccaataata
acagttcaccaggcaaaagggttagagtatgaaactgtatttatatcaggtgcgcagcaa
aatacatttccatcatatatgtcaataaaatcaaataacctggaagaagaaaagagaacc
ttttatgtggccatgacaagagctaaaaaacagctttatattacctgcaatactgatgga
aggtataaaagaacaacaaaaagtgagtttatagatttaataccatggagttatataagt
atagtatga
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