KEGG   Clostridium carboxidivorans: Ccar_03565
Entry
Ccar_03565        CDS       T03979                                 
Symbol
hsdR
Name
(GenBank) type I restriction enzyme EcoKI subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
cck  Clostridium carboxidivorans
Brite
KEGG Orthology (KO) [BR:cck00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cck02048]
    Ccar_03565 (hsdR)
Enzymes [BR:cck01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Ccar_03565 (hsdR)
Prokaryotic defense system [BR:cck02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Ccar_03565 (hsdR)
SSDB
Motif
Pfam: EcoEI_R_C ResIII SWI2_SNF2 DEAD Helicase_C DUF4145 AAA_19 HSDR_N AAA_34 DUF4441 FabMG Helicase_RecD Peptidase_C65
Other DBs
NCBI-ProteinID: AKN29959
UniProt: C6PP57
LinkDB
Position
827150..830422
AA seq 1090 aa
MNNFTFLKEKWPILENLGRLAERNLYIDSNTTFIKCGMFGEIVVRYMFSMEDIDTNLIAH
DNSHNNRIKLLKREDLIPEDIDNILHMLRIKRNDAAHNGFENVEKAKVQLELTFKLAVWF
MQTYGEWSFEPKPFVMPDEKENEHIDNVNEISKEYEEKYKALEDELNALKDQEKDKEELE
KRREQGKRASRRIELSEAETRRIIDDQLKSAGWEADTINIRYSKGARPQKGRNLAIAEWP
TYSEEKGNGKVDYALFIGEKLVGFIEAKKYSKDVAGTMIEAKNYAVGVKEEHDAYVISKW
NDYKVPFLFAANGRKYIKEIEDKSGVHFLDCRNARNNDKVLQGWYSPEKLEAMLEENIEE
ANKSLDELSFEFLKSENSIGLRDYQVEAIKAVEKVITEGKKKSALVIMATGTGKTRTVLG
LVYRLIKTNRYKRILFLVDRTSLGDQAFDTFKEVKVEDLKTLNQIYNINGLDEKLIDKET
KIHIATVQAMVKRIMYNEDETNVPSVGDYDCIIIDEAHRGYTLDKEMTDSEVEWRDDRDF
LSKYKKVIEYFDAFKVALTATPALHTTMIFGEPVYNYSYRAAVIDGYLVDHEPPHLIQTE
LTRDGVHYNKGDKVAKYNKFTGELINGAELEDNVDFEIDQFNKKVIVEAHTRAALEEVAK
YIDPENDKGKTLIFAASDAHADMIVRLLKDIYKETIGGVDDNSILKITGSIKDPELAIKK
FKNENYPNVAVTVDLLSTGIDVPRIDKIVFLRRVKSRILYEQMLGRATRLCDDIQKTHFE
IFDCVRLYEALKDITNMNPVAANGAASFKILKETLERSESIEEKEAVVNKVIAKLQRKKK
LIDEKERLIFKSLCNDKTPEEFIKELRGVDAEKAAKEIISHNSLVEYLDEKYSNEEIIIV
SDKKDRVISHTRGYGKGKKPEDYIDEFKKYIEENKNTIQALEVVCTRPQDLTKEALKQLK
AILDDKGFNEEYLNTAWQDLNNEEIVADIIAFIRQQALGSPLESNEERVKRAVSKIKKEY
YFTKPQENWLIRIEKVMLKEVVIDKETLNTGSFKAQSGGFDRLNEKMFNGNLEDIINKLK
AYMFEDKEIS
NT seq 3273 nt   +upstreamnt  +downstreamnt
atgaataactttacattcttaaaagaaaaatggcctatcctagaaaatctaggaagatta
gcagaaagaaatctttacatagattcaaatactacatttataaaatgtggtatgtttggt
gaaattgtagttcgatatatgttttcaatggaagatattgatactaatttaatagctcat
gataacagtcataataatagaataaagctattaaaaagggaggatttgattccagaagat
attgataatatacttcatatgcttagaataaaacgaaatgatgcagctcataatggattt
gagaatgttgaaaaagcaaaggttcaattggagttaacatttaaattagctgtttggttt
atgcagacttatggagagtggagttttgagcctaaaccatttgttatgcctgatgaaaag
gaaaatgagcatatagataatgttaatgagatatccaaagaatatgaagaaaagtataaa
gctttagaagatgaacttaatgctttaaaggatcaggaaaaagataaggaagagttagaa
aagcgcagagaacaaggtaaaagagctagtagaagaattgaacttagtgaagctgaaaca
agaagaattattgatgatcaattaaaatcagcaggatgggaagctgacaccattaatata
agatattcaaagggggcaagacctcaaaaaggtagaaatttagctatagctgaatggcct
acttattcagaggaaaaaggcaatggtaaagttgattatgcattatttattggagaaaaa
ttagttggatttatagaagctaaaaaatattctaaagatgtagctggaactatgattgaa
gctaaaaattatgctgtaggagtaaaagaagaacatgacgcttatgttatttctaaatgg
aatgattataaagtaccatttttatttgcagctaatggcagaaaatatataaaagaaatt
gaagataagagcggtgttcatttcttagattgcagaaatgcaaggaataatgataaagtc
cttcaaggatggtattctccagaaaagcttgaagctatgcttgaggagaatattgaagaa
gccaataagagcttagatgaattaagctttgaatttttaaaatcagaaaacagcataggt
cttagagattatcaagttgaagcaataaaagctgtagagaaggttattacagaaggaaag
aaaaaatcagctttagtaattatggctacaggcacaggaaaaacaagaactgtattgggg
cttgtttataggcttataaagactaatagatataaaagaattctatttttagttgataga
acttcactaggagatcaagcctttgatacttttaaggaagtaaaagtagaagatttaaag
accttaaatcaaatttacaatattaatggtcttgatgaaaagcttattgataaggagact
aaaattcacatagcaacagtacaggctatggttaaaagaatcatgtacaatgaagatgaa
accaatgttccgtctgttggtgattatgattgtataataattgatgaagcacacagagga
tatacattagacaaagaaatgactgatagtgaagttgaatggagagatgatagagatttc
ttaagtaaatataaaaaggtaatagagtattttgatgcctttaaagttgcacttacagct
acaccagcccttcatacaacaatgatatttggagaacctgtatataactatagttataga
gctgcagttattgatggatatcttgtagaccatgaaccacctcaccttatacaaactgaa
cttactagagatggagttcattataataaaggtgacaaggttgctaaatataataaattt
actggtgagcttattaatggagcagaactggaagataatgtggattttgaaatagatcag
tttaataaaaaagtaattgtagaagctcatacaagggcagctcttgaagaagttgcaaag
tacatagatcctgaaaatgataaaggaaaaaccttaatttttgcagctagtgatgctcat
gctgatatgatagtcagattattaaaagatatctacaaggaaactataggtggagttgat
gataattcaattttaaagataacaggcagcataaaagatccagagcttgctattaagaaa
ttcaaaaatgaaaattatcctaatgtagcagttacagtggatttattatctacaggaatt
gatgttccaagaattgataagatagtttttttaagaagagtaaagtcaagaatactttat
gagcaaatgttaggcagggctacaagattatgtgatgatatacaaaaaacacactttgaa
atatttgactgtgtaaggctttatgaagctcttaaagatataacaaatatgaatccagtt
gctgcaaatggagcagcaagctttaaaatattaaaggaaaccttagaaagatcagaaagc
attgaagaaaaagaagctgtagttaataaggtaatagcaaaattacaaagaaaaaagaaa
ttaatagatgaaaaggaaagattaatttttaaaagcctttgtaatgataaaacaccagaa
gaatttatcaaggaattaagaggtgttgatgccgaaaaggctgcaaaagaaataatcagt
cataattctttggtggaatatttagatgaaaaatatagtaatgaagaaataataatagtt
tctgataaaaaagatagggtaatatcacatacaagaggatatggcaaaggtaaaaagcca
gaggattatatagatgaatttaaaaagtatattgaagaaaataaaaatacaattcaagct
ttagaagtagtatgcacaagaccacaagatttaaccaaggaagctttaaagcagcttaaa
gccatattagatgacaaaggctttaatgaggaatacttaaatactgcatggcaagactta
aataatgaagaaatagtagcagatataattgcttttataaggcagcaggcactgggaagt
cctttagaatctaatgaagaaagggtaaaaagagcagtttctaaaataaagaaagaatat
tattttacaaaacctcaagaaaattggctaattagaatagaaaaagtgatgttaaaggaa
gtagttatagataaagaaacattaaacacaggaagctttaaagctcaaagcggtgggttt
gacagattgaatgaaaagatgtttaatggtaacttggaagatataataaataaattaaag
gcatatatgtttgaagataaggagattagctaa

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