Clostridium carboxidivorans: Ccar_03820
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Entry
Ccar_03820 CDS
T03979
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cck
Clostridium carboxidivorans
Pathway
cck03420
Nucleotide excision repair
cck03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ccar_03820
03430 Mismatch repair
Ccar_03820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cck03400
]
Ccar_03820
Enzymes [BR:
cck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ccar_03820
DNA repair and recombination proteins [BR:
cck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ccar_03820
MMR (mismatch excision repair)
Other MMR factors
Ccar_03820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
DEAD
PhoH
Viral_helicase1
SLFN-g3_helicase
UvrD_C_2
ResIII
DUF2045
AAA_30
NPHP3_N
AAA_16
AAA_11
DUF2852
NACHT
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AKN30000
UniProt:
C6Q225
LinkDB
All DBs
Position
complement(882351..884597)
Genome browser
AA seq
748 aa
AA seq
DB search
MNNFEWNLENEWLQEVLKEAQKQFNEEHDFKEKFRKDSIETQRQLWQDVGSLSITNGLDQ
VVDFMEFITTMKIQKKRHEFVRKLEEKYKKILLSPYFGRMDFLEKGDEKTQKCYIGIFNL
INDNFDFLVYDWRAPISSMYYDYEIGKANYTCPEGKIHGEITLKRQYKINNGKIEYMFDS
NLNIDDEILQGMLSKSTDSKMKNIVTTIQREQNKVIRNEDYKNLIVQGPAGSGKTSIALH
RIAYILYKHRDKIASKNIIIFSPNKIFNEYISNVLPQLGEDNMCQTTFKEYMQKVLESTF
KKEDYSEMMENILAAKNEPMYQKRIMSIKYKSSIQFIDILKKYVDYTEKEDRNFKDIIVR
DKLIISSEDLQELFFKDYIQLPLKRRLQKIRERILFLMEPYEKDWVEEVTSELKESDSYI
DKTEARNRSIAIVKNEMKDIYSEINKITEFDLMDIYKKLFMKLECFSANFNTGYSKKEID
EIKSYTLGNLRSEKLNYEDQPPLLYLKGALEGIPKTSEIKYVIIDEAQDYTPLQYEIFYQ
LFKHANITILGDLNQSINPFMNVGDYSNISHIFPKDNTCIINLSKSYRSTMEITKFSRKL
LAKEITDGCVERSGAEPLILGFSGEKAIKEKFIEDIKAYKEKGYKSIGIITRTVKEANEV
YNFLKERVHVKAILKDDDEYVSDTLVIPAYLAKGLEFDVVLIYNAGDENYCCEEERLLLY
TACTRALHILRIYYSGNCTPLLKENYQI
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaactttgaatggaacctggaaaatgaatggctgcaagaagtgctcaaagaagct
caaaaacaatttaacgaagaacatgattttaaagaaaaatttagaaaggattctattgaa
acacaaaggcaactttggcaggatgtaggctctttgtccataactaatgggttggatcaa
gttgtagactttatggagttcatcacaactatgaaaatacagaaaaaaagacatgaattt
gtcagaaagcttgaagaaaaatataaaaaaatacttttatctccctactttgggaggatg
gattttctcgaaaaaggagatgagaaaactcaaaagtgttatattggaatcttcaatctt
atcaatgacaattttgattttctagtatatgattggagagcacccatttctagcatgtac
tatgattatgaaattggaaaagctaattatacatgccctgaaggaaaaattcatggtgaa
attactttaaaaagacagtacaaaattaataatggcaaaattgagtatatgtttgatagc
aatttaaatattgatgatgaaatacttcaaggtatgttgagcaaaagtactgatagtaaa
atgaagaatatagtgacaactattcaaagagaacaaaataaagtaattcgtaatgaggat
tataaaaatttgattgttcaggggcctgctggaagtggaaaaacttccattgctcttcat
agaattgcatacatcttatataagcatagagataaaatagcatcaaaaaatataataata
ttttctccaaataaaatttttaatgagtacatttccaatgtattacctcagcttggagaa
gacaatatgtgtcaaactacatttaaagaatatatgcaaaaggtcttagaatctactttt
aaaaaggaagattacagtgaaatgatggaaaatattcttgcagctaagaatgaaccaatg
tatcaaaaaagaataatgagtataaaatataaatcttccatacaatttatagatatatta
aaaaaatatgtagactatactgaaaaagaagatagaaattttaaagatattattgtgaga
gacaagttaataatctcctctgaggatttgcaggagctgttttttaaagattatatacag
cttccactaaaaagaagactccaaaagataagagaaagaatattatttcttatggaacct
tatgaaaaagattgggttgaagaagtaaccagtgaacttaaggagtcagattcttatata
gataaaacagaggctagaaatcgtagtatagctattgtaaaaaatgaaatgaaggatata
tattctgaaatcaataaaataacagagtttgatttaatggatatttataaaaagcttttt
atgaaattggaatgtttttctgcaaattttaatactggatacagcaaaaaggaaattgac
gaaataaaaagctatactttggggaatttgaggtctgaaaagcttaattatgaggatcaa
cctcctcttctatatctcaaaggagcactagaaggaattcccaaaacctcagaaataaaa
tatgttattattgatgaagcacaagattatacgccattgcagtatgaaatcttctatcag
ctttttaagcatgctaatataaccatactgggtgaccttaatcaatccatcaatccattt
atgaatgtaggagattatagcaacatctctcatatatttcctaaagataatacctgcata
ataaatttaagcaaaagttacagatcaaccatggaaattactaagttctccagaaagctg
cttgccaaggagattactgatggatgtgtagaaagaagtggagctgaacctttaatcctt
ggtttttcaggtgaaaaagccataaaagaaaaatttatcgaagatataaaagcgtataaa
gagaagggttataaatccattggtattataacaaggactgtaaaagaagcaaatgaagta
tataattttttaaaagaaagggttcatgttaaagccatattgaaggatgatgatgaatat
gtaagtgataccttggtaatcccagcatatcttgctaaaggattagaatttgatgtagtt
cttatatataatgcaggagatgaaaattattgctgcgaggaggaaaggcttctgctatat
accgcttgtaccagagctcttcatattttgcgcatatattattcaggcaactgtactcca
ttattgaaagaaaattaccaaatttaa
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