Clostridium carboxidivorans: Ccar_14420
Help
Entry
Ccar_14420 CDS
T03979
Name
(GenBank) LacI family transcriptional regulator
KO
K26609
LacI family transcriptional regulator, galacturonate utilization repressor
Organism
cck
Clostridium carboxidivorans
Brite
KEGG Orthology (KO) [BR:
cck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cck03000
]
Ccar_14420
Transcription factors [BR:
cck03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Ccar_14420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_38
HTH_7
HTH_3
MarR_2
HTH_10
HTH_Crp_2
Intron_maturas2
TnsD
Motif
Other DBs
NCBI-ProteinID:
AKN31992
UniProt:
C6PWS6
LinkDB
All DBs
Position
complement(3295322..3296332)
Genome browser
AA seq
336 aa
AA seq
DB search
MSVTIKDIAKLANVSHTTVSRALNNSPLINEETKSKIKAIAEQLNYVPNYIAKSLVLDKS
YTIGLFFSSISRGTSSGFFFETVTGVNSAIEENYNLVVRGIDNYKDFTAINKKRFDGIVL
MSQSDNDNYFVYDVMQKGIPLVVLNRELEEEALINIVSDDKEGTFKAVEHLIKNGHRDIA
IIEGKKEFKSTQNRKDGFMEALIHYNVPVRSEYMIKGNFDMKSGYDATKKLMNLDKVPTA
VFCSNDDMAIGAIKAAFDSGLSVPKDISIVGFDDIAVSEYSTPSLTTVKRPIEDISIMGG
KKIIDIINGESYKGEKIFLKTKLVIRDSVLKLNENS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaacaataaaagacatagcaaaattagcaaatgtatcacatacaacagtttca
agagcacttaataatagtcctttaataaatgaagaaacaaaaagtaaaataaaagctata
gcagaacagcttaattatgtacctaattatattgcaaagagcttagtattagataaatct
tataccatagggttatttttttccagcataagtagaggtacatcttcaggatttttcttt
gaaacagtaacaggagtaaatagcgctatagaagaaaattataatttagttgtaagagga
attgataattacaaggattttacagccattaataaaaagagatttgatggaattgtcttg
atgagtcaaagtgacaatgataattactttgtttatgatgtaatgcagaagggtattcca
ttagttgttttaaatagagaattagaagaagaagccttaataaatatagtatctgatgac
aaggaaggtacttttaaagctgtagaacacttgataaaaaatggacatagagatatagct
ataatagaaggaaaaaaggagtttaaatccactcaaaacagaaaagatggatttatggaa
gctttgattcactataatgtaccagtacgcagtgaatatatgattaaaggaaattttgat
atgaaaagtggatatgatgctacgaaaaaacttatgaatttagataaagttcctacagca
gttttttgttctaatgacgatatggccataggtgctataaaagcagcttttgatagtggt
cttagtgtaccaaaagacatttcaatagtaggatttgatgatatagcagtttcagaatat
tctacgccatcacttacaactgtaaaaagacctatagaagatataagtataatgggtgga
aagaagataattgatataataaatggagaaagctataaaggtgaaaaaatattccttaag
acaaaacttgtaataagagattctgttcttaaactaaatgagaatagttaa
DBGET
integrated database retrieval system
