Clostridium carboxidivorans: Ccar_16330
Help
Entry
Ccar_16330 CDS
T03979
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cck
Clostridium carboxidivorans
Pathway
cck03030
DNA replication
cck03410
Base excision repair
cck03420
Nucleotide excision repair
cck03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ccar_16330
03410 Base excision repair
Ccar_16330
03420 Nucleotide excision repair
Ccar_16330
03440 Homologous recombination
Ccar_16330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cck03032
]
Ccar_16330
03400 DNA repair and recombination proteins [BR:
cck03400
]
Ccar_16330
Enzymes [BR:
cck01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ccar_16330
DNA replication proteins [BR:
cck03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Ccar_16330
DNA repair and recombination proteins [BR:
cck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Ccar_16330
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ccar_16330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
Imm50
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AKN32344
UniProt:
C6PSZ9
LinkDB
All DBs
Position
complement(3704368..3707010)
Genome browser
AA seq
880 aa
AA seq
DB search
MSKEKLLILDGNSLMNRAFYALPPLTNSQGLHTNGVYGFVTMLLKMREEINPNYIVCTFD
RSAPTFRHNEYKDYKAGRKRMPEELAEQFPVVKKLLNMLSISMFEIDGFEADDLIGTLSV
YAEKKDIEVYIVTGDKDALQLATDNVKVVITKKGITEKEIYDKNRMISEFEVTPTQFIDV
KGLMGDKSDNIPGVPGVGEKTAFKLIKEYGSIENVLNNIDNISGKKIKENLMQYSEQAVF
SKKLATIMVNVPIEIDLNEIKSKENYDVEGVKNLFIELQFKSLIDKVIGEKELKEEIEKE
DIKVDFKNISNIKDLKKLGEDISLIAKDEILYLTFKIVDGNIYSKSYIEKIFLNIDNKNY
VVELEKIYEENNEDTLKCLKDIFENDKIEKVSHNIKVPYTVFKKMGINFTSVKFDTEIAA
YLIDSSRGEYGLNSIIQDYLKIMLQGEEDEIRVKENSLLKDVFETLNKQIKELNMEELLY
EVEQPLTLVLAAMEYEGFKVDNVKLEELGEKFKIEIDKLKKDIYGLAEEEFNINSPKQLG
KILFEKLDLPVIKKTKTGYSTNAEVLEQLLDKHPIIEKITYYRQFTKLYSTYIEGLKAVI
DKDGKIHSSFNQTVTTTGRLSSTEPNLQNIPIKYEMGREIRKVFVPEDENSIILSADYSQ
IELRVLAHIADDENLIDAFLNHSDIHTKTASEVFKVPIDQVTKLQRSNAKAVNFGIVYGI
GDFSLAKDLKISRKEAKNYIDTYFERYPGVKRYMDNVIKQAEDNLYVTTIMNRRRFIPEI
KNSKKMVKAFGERLAMNTPIQGSAADIIKMSMVNVYNILKSKNLKSKVILQVHDELILNV
YKDELEEVKELVKNQMEDVMKLRVPLEVDINLGDNWYEAK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagaaaagttattgatacttgatggaaatagtttaatgaatagagcgttttat
gcactgccaccgttaactaactctcaaggattacatactaatggagtatatggttttgta
acaatgcttttaaaaatgagagaagaaattaatcctaattatatagtttgtacttttgat
agaagtgctcctacatttagacacaatgaatacaaggattataaggctggtagaaaaaga
atgccagaagagctggcagaacaatttccagtggtaaaaaaactattaaatatgctttct
ataagtatgtttgaaattgacggattcgaagcagatgatcttataggaactctttctgta
tatgcagaaaaaaaagacatagaagtttacatagttacaggagataaagatgctcttcaa
ttagcaacagataacgtaaaagttgttataacaaaaaaaggaattacagaaaaagagata
tatgataaaaatagaatgatttcagaatttgaagttacaccaactcaatttatagatgta
aaaggccttatgggagacaaatcagataatatacctggtgttccaggagttggtgaaaaa
acagcctttaaacttataaaagaatatggaagtatagaaaatgtattaaataatatagat
aatattagtggaaaaaaaataaaagaaaatttaatgcagtatagtgaacaggcagtattc
agtaaaaagcttgctactatcatggttaatgttcctatagaaatagatctaaatgaaata
aaatctaaggaaaattatgatgtagaaggtgtaaaaaacttatttatagagcttcaattt
aaatcacttatagataaagtaataggtgaaaaagaattaaaagaagaaattgaaaaagaa
gatattaaagttgactttaaaaacataagtaatataaaggatttaaaaaagcttggggaa
gacataagtttaattgcaaaagatgaaattttatacttaacttttaaaattgtagatggg
aatatttactcaaaaagttatatagaaaagatatttttgaatatagataataaaaattat
gtagtagaacttgaaaaaatatatgaagaaaataatgaagatacattaaaatgtcttaag
gatatatttgaaaatgataaaatagaaaaagtaagtcataatataaaagttccatatact
gtatttaagaaaatgggaataaactttaccagtgtaaaatttgatacagaaatagcagct
tatttaattgattcttctaggggtgaatatggattaaattctattatacaggattatctt
aaaataatgctccaaggagaagaagatgaaatcagagtaaaggaaaattctcttttaaaa
gatgtttttgaaaccttaaataaacaaataaaagaattgaatatggaagaacttttatat
gaagtagaacagccgcttacattggtattagcagctatggaatatgaaggctttaaggtt
gataatgtaaaattagaggaactaggagaaaaatttaagatagaaatagataagcttaag
aaggatatatatgggttggcagaagaagaatttaatattaattctcctaaacagcttgga
aaaatattatttgaaaaacttgatttgcctgtaattaaaaagacaaaaacaggatattcc
actaatgcagaggttttagagcagcttttagataaacatcctattatagaaaaaataact
tactatagacagtttactaagctttattctacatacatcgaaggattaaaagctgtaatt
gataaagatggaaaaatacattctagctttaatcaaacagttactactacaggaagattg
tcaagcacggaacctaatcttcaaaatataccaataaaatatgaaatgggtagagaaata
agaaaagtatttgtacctgaagatgaaaattcaataatactttcagcagattattcacaa
atagaactcagagtacttgctcatatagcagatgatgaaaatttaatagacgcttttctt
aatcatagtgatattcatactaaaacagcatcagaagtgttcaaagtgcctatagaccaa
gttactaagcttcaaagaagtaatgctaaggctgtaaactttggtatagtttatggcata
ggtgactttagtttggctaaggatttaaagatatctagaaaagaagctaagaattatata
gatacttatttcgaaagatatccaggtgtaaaaaggtatatggataatgttataaagcag
gcagaggataatctgtatgtaactactataatgaatagaagaaggtttatacctgaaatt
aagaattctaaaaagatggtaaaggcttttggggaaagattagccatgaatacacctatt
caaggcagtgctgcagatataataaagatgtccatggtaaatgtatataacatcttaaag
agtaaaaatttaaagagtaaagtaatacttcaagtgcatgatgaacttattttgaatgta
tataaggatgagttagaagaagtaaaagaattagttaaaaatcaaatggaagatgttatg
aaattaagagtacctttggaagtggatattaatcttggagataattggtacgaggcaaaa
taa
DBGET
integrated database retrieval system
