Clostridium carboxidivorans: Ccar_18465
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Entry
Ccar_18465 CDS
T03979
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cck
Clostridium carboxidivorans
Pathway
cck03420
Nucleotide excision repair
cck03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ccar_18465
03430 Mismatch repair
Ccar_18465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cck03400
]
Ccar_18465
Enzymes [BR:
cck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ccar_18465
DNA repair and recombination proteins [BR:
cck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ccar_18465
MMR (mismatch excision repair)
Other MMR factors
Ccar_18465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
RGM_C
Motif
Other DBs
NCBI-ProteinID:
AKN32712
UniProt:
C6PX68
LinkDB
All DBs
Position
complement(4132714..4134978)
Genome browser
AA seq
754 aa
AA seq
DB search
MDLKMLLNKEQYEAAVQVNGPLLILAGAGSGKTRVLTYRIAHMINDLNIYPSKILAITFT
NKAAGEMKDRVRSLVGNEADNMWVSTFHSSCVRILRREIDKLGYNKNFAIYDTYDQKILI
KQCMDELNINDKDITDREIINKIGEQKDNLISPDRYKKENEGNYRLNKIADAYMLYQKKL
KSNNALDFDDLIYKTVELFKKNEEVLDFYQRKFQYVMVDEYQDTNKSQYELVKLLATKHR
NICVVGDDDQCIYAWRGADIKNILGFEKDYPEAKVIKLEQNYRSKGNILKAANDVIKNNA
ERKRKVLRTENEDGERIKIYRAYSDMEEANYVASQIRKITKDNNKKYKDFAVLYRTNAQS
RTFEDIFMKSNIPYRIIGGLKFYDRKEIKDILAYLKFVNNPLDDVSLRRIINVPKRSIGD
ATVKKVQEFANSMEECMYSVLLDIEQVPSIPTRGTASIKKFVSLINSFIRSKDEIAVSSL
IKEILDTTGYLEELKDSQDIDALSRIENLKELVSAAVEFESTSEDKSLSAFLEKVTLVSD
IDNFNEDADTVVMMTVHSAKGLEFPVVFMVGMENGIFPGSQSLNDFSEMEESRRLCYVGI
TRAKEQLYMTSAEQRRVFGRTVSYSESDFIGEISKDLRENDNMTARNTIKSKSFSTYSNR
STTITNSVTSHMNRSVNNSMPSSFGESSLNKNKENANSLKIEDIKAGLKVKHDKFGIGTI
VGVSKSGEYTKLTIVFDKAGIKNLMYGVASLEFV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaatgcttttaaataaagaacaatatgaggcggctgtacaggtaaacgga
ccgctattaattttggcaggagcgggttcaggaaagacaagggtattaacttatagaata
gctcatatgataaatgatttaaacatatatccttcaaaaattttagccataacttttaca
aataaagctgctggtgaaatgaaggatagagtcagaagcttggtaggaaatgaagcagac
aatatgtgggtttccactttccattcaagctgcgtaagaatattaagaagagaaatagat
aaattaggttataataagaattttgctatatatgatacttatgatcaaaaaatattgata
aagcaatgtatggacgagttaaacataaatgataaggacataacagatagagaaataata
aacaaaataggagaacaaaaagacaatttaatatcaccagatagatataaaaaagaaaat
gaaggtaattatagattaaacaaaattgcagatgcatatatgttataccagaagaaatta
aagagtaataatgctttggattttgatgatttaatctataaaactgtagaattattcaag
aaaaatgaagaagttttagatttttatcaaagaaaattccaatatgttatggtagatgag
taccaagatacaaataaatcacaatatgaattggtaaaacttctagcaactaaacataga
aatatatgtgtagttggagatgatgatcagtgcatttatgcttggagaggtgcagatata
aaaaatatattagggtttgaaaaggactatcctgaagcaaaggttataaaattagagcaa
aattatagatccaaaggaaatatattaaaagctgctaatgatgttataaaaaataatgca
gaaagaaaacgtaaagttcttagaacagaaaatgaggatggagaaagaataaagatatat
agagcttattctgacatggaagaagcaaattatgtagcttcacaaataagaaaaattact
aaggataataacaaaaaatataaagattttgccgtactctatagaacaaatgcgcagtcc
cgtacttttgaagatatttttatgaaatccaatataccatataggataattggaggacta
aagttttatgatagaaaagaaataaaggatatattagcctacttaaaatttgtaaataat
cctcttgatgatgtgagcttaagaagaataataaatgtacctaaaagaagcataggtgat
gctactgtgaaaaaggttcaagaatttgcaaattctatggaagaatgtatgtacagtgta
cttcttgatatagagcaggtgccaagtatacctacaagaggaactgcatccataaaaaaa
tttgtaagtcttataaatagctttataagaagtaaagatgaaatagctgtttcaagtctt
ataaaagaaatattggatactacaggctacttagaagaattaaaagactctcaggatata
gacgcattaagtagaattgaaaatttgaaagaattggtatccgctgcagtggaatttgaa
agtacttcagaagataaatcattatcagcatttttagaaaaagttactttagtttctgat
atagataattttaatgaagatgcagatactgtagttatgatgactgtacatagtgctaaa
ggtttggagtttccagtagtatttatggttggtatggaaaatggtatatttccaggaagc
caatcattaaatgattttagtgaaatggaagaatcaagaagactttgttatgttggtata
actagggcaaaagagcaattatatatgacatcagcagagcaaagaagagtttttggaaga
actgtatcttattctgagtccgattttataggagaaatatctaaggatttaagagagaat
gacaatatgacagcaagaaatactattaagtcaaaaagttttagtacatacagcaataga
agtactactataactaatagtgtaactagtcatatgaatagaagtgtaaataatagtatg
ccgtcttcctttggtgaatctagtttaaataaaaataaagagaatgctaactcattaaaa
attgaagatattaaggcaggattaaaggttaagcacgataagttcggaataggaactatt
gtaggtgtttcaaaaagcggagaatacacaaagcttaccatagtttttgacaaggctgga
attaaaaatttaatgtatggagtagcatcactagaatttgtataa
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