Clostridium carboxidivorans: Ccar_19655
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Entry
Ccar_19655 CDS
T03979
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cck
Clostridium carboxidivorans
Brite
KEGG Orthology (KO) [BR:
cck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cck03016
]
Ccar_19655
Enzymes [BR:
cck01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Ccar_19655
Transfer RNA biogenesis [BR:
cck03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Ccar_19655
Prokaryotic type
Ccar_19655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AKN32944
UniProt:
C6PXK3
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All DBs
Position
complement(4420485..4421228)
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AA seq
247 aa
AA seq
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MALIKNIKLVIEYDGTNYCGWQRQDNAESIQQKVEEAIERATKVFSKVTGSSRTDAGVHA
EGFVCNFFTESSIPPENFKEALNVFLPEDIVIIESKEVDKEFHSRFNSIGKKYVYTVLTG
SHRPAIRRNYVYYFNKNLNIGQMKEAAKYFLGTHDFSAFKKSGSSVKTSIRTIKELNIDI
DGNYIKFSIIGDGFLYNMVRIIVGTLLDVGTNRFNPEDIDKIISSKNRSNAGKSAPACGL
TLEKVFY
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcattaattaagaatattaaactagtaattgaatatgatggtactaattattgtgga
tggcagagacaagataatgctgagtcaattcaacaaaaggttgaggaagctattgaaagg
gctactaaagttttttcaaaggttacaggatctagtagaacggatgcaggagttcatgcc
gaagggtttgtttgtaacttttttacagagagttcaataccacctgaaaattttaaagag
gcgctaaatgtttttttaccagaggatatagtgattattgagtctaaggaagtagacaaa
gaatttcattctagatttaatagtataggaaaaaagtatgtttatacagtgttgactgga
tctcatagaccagcaataagaagaaattatgtatattactttaataaaaacttaaatatt
ggacaaatgaaggaagcagcaaagtattttttaggaactcatgacttttctgcttttaag
aaaagtggaagttctgtaaaaacatctattagaacaataaaagaactcaatatagatata
gatggaaattatataaaattttctattataggagatggatttttatataatatggttaga
attatagtaggaactcttttagatgtaggaactaataggtttaatcctgaagatattgat
aaaataattagttctaaaaatagatcaaatgcaggaaaatctgcgccagcatgtggatta
actttagaaaaagtattttattag
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