Clostridium carboxidivorans: Ccar_19980
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Entry
Ccar_19980 CDS
T03979
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cck
Clostridium carboxidivorans
Brite
KEGG Orthology (KO) [BR:
cck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cck03400
]
Ccar_19980
DNA repair and recombination proteins [BR:
cck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ccar_19980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DUF7125
DnaB_C
Lon_C
AAA_22
AAA_16
nSTAND_NTPase5
GvpD_P-loop
AAA
nSTAND3
ABC_tran
AAA_14
Zn_Ribbon_YjdM
RecA_N
AAA_24
NTPase_1
ATPase_2
SLFN-g3_helicase
NB-ARC
Rad51
divDNAB
Elong_Iki1
ResIII
KdpD
NPHP3_N
ATP-synt_ab
TackOD1
AAA_29
Viral_helicase1
NACHT
AAA_28
AAA_17
TK
zf-RING_10
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AKN33007
LinkDB
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Position
complement(4467985..4469340)
Genome browser
AA seq
451 aa
AA seq
DB search
MAKNKTIFVCQECAYESLKWLGKCPNCNSWNSMVEETKVQSNSSSVNISSNSLPKSILNI
KSSEYERFDTGITELNRVLGGGIVKGSLTLISGAPGIGKSTLLLQAANSISRKYGKVLYV
SGEESEEQIKMRGDRLEAMSSDLYIVSETSIEKIEEHIENTKPVFVIVDSIQTLFKQSIT
SAPGSVSQVRESSNDIMRIGKTKGIPFFIVAHVTKQGELAGPRVLEHMVDAVLSFEGERT
EEFRILRTMKNRFGTTSEIGVFEMRESGLEEVSNPSAVFLEETDFQKEGSIVIGIMEGTR
PILIEIQALVSETKAVMPRRTAVGVDVSRLNLILAVLEKKLKIPFYNCDVYVNVVGGLNI
EGTFADLGLALALISSVKSKEINLEKLIVFGEIGLTGEVRPVAFGDRIVNEAEKMGFKNI
VIPARNKEKVKNKSINIIGVSSLKEATNKVF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaataagactatttttgtatgccaagaatgtgcatatgaatcattaaaatgg
cttgggaaatgtcctaattgtaatagttggaatagtatggttgaggaaactaaagtacaa
agcaactcatctagtgttaatataagttctaatagtttgcctaagagtatactaaatata
aaatctagtgaatatgaaagatttgatactggcataacagaattaaatagagtattaggc
gggggaatagtaaaaggttcactaactttaatatctggtgcaccgggtataggtaaatct
acattactattacaagcagcaaatagtatttctcgaaaatatggaaaagttctttacgtt
tcaggagaggaatctgaagagcaaataaaaatgagaggtgataggctggaagctatgtct
agtgatttatatatagtttctgagactagtattgaaaaaatagaggaacatatagagaat
actaaacctgtttttgttattgtagattccatacaaacgctttttaaacaatctattact
tctgcaccaggaagtgtatctcaagttcgggaaagctctaacgatattatgcgtataggg
aaaacaaaaggcataccattttttatagtagctcatgttaccaaacaaggtgaattagca
ggacctagagtattagaacatatggtggatgctgtactatcctttgaaggagagaggact
gaagaatttagaatacttagaactatgaaaaatcgttttggaactactagtgagattgga
gtattcgaaatgagagaaagtggtcttgaagaagtatcaaatccgtcagcagtatttttg
gaagaaactgattttcaaaaggaaggttcaatagttataggaataatggagggaactagg
cctatattaatagaaatacaagcactagttagcgaaactaaggcagtaatgcctaggaga
actgcagttggtgtagatgtttctagactgaatcttattttagcagttttagaaaaaaaa
ttaaaaatacctttttataattgtgatgtttatgttaatgtagtaggaggacttaatatt
gaaggaacctttgcagatttaggattggctttagcacttatatctagcgttaaatctaag
gaaataaacttagagaaattaatagtatttggagaaataggacttacaggagaagtaaga
cctgtagcatttggagacagaattgtaaatgaagcagagaaaatgggatttaaaaatatt
gtcataccagcaagaaataaggaaaaagtaaaaaataaaagtataaatattataggagtc
tcttctcttaaagaggctacaaataaagttttttag
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