Clostridium carboxidivorans: Ccar_20035
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Entry
Ccar_20035 CDS
T03979
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cck
Clostridium carboxidivorans
Pathway
cck00470
D-Amino acid metabolism
cck00550
Peptidoglycan biosynthesis
cck01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cck00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Ccar_20035 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ccar_20035 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cck01011
]
Ccar_20035 (murD)
Enzymes [BR:
cck01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Ccar_20035 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cck01011
]
Precursor biosynthesis
Amino acid ligase
Ccar_20035 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
PipB2_N
CbiA
QRPTase_C
Motif
Other DBs
NCBI-ProteinID:
AKN33014
UniProt:
C6Q0E6
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All DBs
Position
complement(4482595..4483971)
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AA seq
458 aa
AA seq
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MKKNFADFKKFIKDKNTAVVGIGISNKPLINFLLKLGAKVSAFDKKSEEQLGDTAKELRE
KGVNLVLGENYMDSLNGFDVIFKTPSMRIDTPALINAKKQGAYITSEMEEFIKYCPAKVY
GVTGSDGKTTTTTLIYNILKQQGYKTWVGGNIGTPLFTEIEKMKSDDKVVLELSSFQLMT
MNVSPEVAVVTNLSPNHLDIHKDMQEYIDSKKNIFKYQQSESLLILNRDNNLTNSMFNEA
KGRVLEFSIKEKVKDGAYFEENKLYIKEKEVCKLNEIQIKGMHNVENLLAAFCAVSDDVN
IENMRKTAISFTGVEHRCEFIREIDGVKYYNDSIATSPSRTLAGLKAFEKPVILIAGGYD
KKIPLDVLAEEGYENIKALILVGATKDKIKDAFSKVMKKKNIEIPMVIEESLEKALSSAR
GFAKEGDIITLSPACASFDMFPNFEARGNKFKELVKEL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaattttgcagattttaaaaaatttataaaggataaaaatactgctgtggtt
ggcataggtataagcaataagcctttgataaattttttgctaaagttaggggcaaaagtt
agtgcttttgataaaaaaagtgaagaacagttaggggatacagctaaagagcttagggaa
aaaggagttaaccttgtattaggagaaaattacatggacagtttaaatgggtttgatgta
atatttaaaactccatctatgaggatagatactccagcacttataaatgcaaaaaaacaa
ggagcttatataacttctgaaatggaggaatttataaagtattgtcctgctaaagtatat
ggcgttactggtagtgatggtaagacaacaactactacattaatatataatatactaaag
cagcagggatataaaacttgggtaggtggtaacataggaacacctttatttactgaaata
gaaaaaatgaagagtgatgataaagtagtattggaattatcaagttttcaacttatgact
atgaatgtttctccagaggttgcagttgttacaaatttaagcccaaatcatttagatata
cataaagatatgcaagagtatatagattcaaaaaagaatattttcaaatatcaacaatca
gaaagtttattgatactaaatagggataataatttaactaactctatgtttaatgaagct
aaaggaagagtattggaatttagtataaaagagaaggttaaagatggagcttattttgaa
gaaaacaaattatacataaaagaaaaagaagtttgtaagttaaatgaaattcaaataaaa
ggaatgcataatgtagaaaatttacttgctgctttttgtgcagttagtgatgacgttaat
atagaaaatatgagaaaaacagctataagttttacaggagtagaacataggtgtgaattt
ataagggaaatagatggagtaaagtattataatgattcaatagctacaagtccaagtaga
actttagcaggacttaaggcatttgagaaaccagtaattttaatagcaggtggatatgat
aaaaaaattcctttagatgtattagcagaagaaggatatgagaatataaaagcgttaata
ttagttggagcaactaaagataaaataaaagatgcattttcgaaagttatgaagaagaaa
aatatagaaatacctatggtaattgaggaaagcttagaaaaggcgctttcaagtgctagg
ggttttgctaaggaaggagatataataactctttcgcctgcttgtgctagttttgatatg
ttccctaattttgaagctagaggcaataagtttaaggaattagttaaagaattataa
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