Clostridium carboxidivorans: Ccar_20135
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Entry
Ccar_20135 CDS
T03979
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
cck
Clostridium carboxidivorans
Brite
KEGG Orthology (KO) [BR:
cck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cck03032
]
Ccar_20135
03036 Chromosome and associated proteins [BR:
cck03036
]
Ccar_20135
03400 DNA repair and recombination proteins [BR:
cck03400
]
Ccar_20135
DNA replication proteins [BR:
cck03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Ccar_20135
Chromosome and associated proteins [BR:
cck03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Ccar_20135
DNA repair and recombination proteins [BR:
cck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Ccar_20135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
AARP2CN
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-ProteinID:
AKN33030
UniProt:
C6PQE0
LinkDB
All DBs
Position
complement(4500330..4500605)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELIASIAEKSKLTKKDVEVVLKGFIESVEETLEKGDKVQLVGFGTFETRKRAARVG
RNPRTKEEIEIPESTVPVFKAGKEFKDKVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaatcagaattaatcgcaagtatagcagaaaagtcaaaactaacaaagaaggat
gtagaagtagttttaaagggttttatagaaagtgttgaagaaacacttgaaaaaggtgat
aaagttcaactagttggatttggaacatttgaaacaagaaagagagctgcaagagtaggc
agaaatccaagaactaaagaagaaatagaaataccagaatcaacagttccagtatttaaa
gctggtaaagaatttaaagataaagtaaacaagtaa
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