Clostridium carboxidivorans: Ccar_22810
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Entry
Ccar_22810 CDS
T03979
Name
(GenBank) transcriptional regulator
Organism
cck
Clostridium carboxidivorans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
PAS_9
HTH_50
HTH_8
AAA_2
AAA_5
AAA
PAS_8
AAA_7
Mg_chelatase
PAS_4
Zeta_toxin
NUMOD1
AAA_18
HTH_46
Motif
Other DBs
NCBI-ProteinID:
AKN34234
LinkDB
All DBs
Position
5052458..5053873
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AA seq
471 aa
AA seq
DB search
MKLEFVKFKLKELQDVIEGFNDGVYVTDKCGNTILVNKYWEKITGIKREEVLEKNMSSLE
KEGYISKSATLIVLKDKKSVTIEQKLRTGKKVLVSSNPIFDREGNVTMVVTSVRDVIELY
ELEEELEKKEEILNSQHSSNTDSLKNQLLNFSDIIVEDENMINVLQMAKRVAKVDATVLL
LGETGAGKEEVAKYIHKNSKRCNNNFIKINCGAIPEHLMESEFFGYEKGAFTGANREGKV
GLFEMCNNGNLFLDEVGELPLDMQVKLLRVLQEGEITRVGGTKTIKIDVRIIAATNRDLK
KMVDKKLFREDLYYRLNVIPITVLPLRKRRKDIKPLAMHFLDKFNKKYGFNKSLTCAAVD
YLYKYDWPGNVRELRNIIERTVIMSKGDKILRDDLTVRMLGDYSLVDTNDKDKHFTLKEA
VENLEEVLIETTFKKYGNVRAAAKELGIDASTLVRKRKKYRSKSDCKNSDT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagagttcgtcaaattcaaattgaaggaattacaggatgtaattgaaggattc
aatgatggtgtttatgttacagataaatgtggcaatactatattagtaaataagtactgg
gaaaaaattactggtataaaaagagaagaagtattggaaaaaaatatgtcatctttggaa
aaagagggatatatatcgaaatcagcaactctcatagttttaaaagataaaaaaagtgta
accattgaacaaaaattaagaacagggaaaaaggtattggtttctagtaaccctatattt
gatagagaaggaaatgtaactatggtagttacaagtgtaagagatgttatagaattatat
gaattagaggaagagcttgaaaaaaaagaggagatacttaatagtcagcattcttccaat
acagatagtttaaaaaatcaacttttaaatttttcagacattatagtagaagatgagaac
atgattaatgttttacaaatggctaagagagtagcaaaagtagatgctactgtgcttttg
cttggagaaacaggtgctggtaaggaagaagttgctaaatatatacataaaaatagtaaa
agatgcaataacaattttataaaaataaattgtggagcaattccagagcatctcatggaa
tcagaattttttggttatgaaaaaggagcttttactggtgctaatagagaaggtaaagtt
ggattatttgaaatgtgcaacaatggaaatttatttttagacgaagtaggagaattgcca
ttggacatgcaagttaaacttcttagagtgcttcaagaaggtgaaattaccagagtaggt
ggtactaagaccattaaaatagatgtaagaattatagcagcaactaatagagatttgaag
aagatggtagacaaaaaactttttagagaagacttatattatcgtttgaatgtaatacct
attacagtattacctttaagaaaaagaagaaaagatattaagcctttagcaatgcatttt
ttagataaatttaataagaaatatggctttaataagtctctaacttgtgcagcagtggat
tatttatataaatatgattggcctggaaatgtaagagaacttagaaatataatagaaaga
actgtaattatgagtaaaggtgataagatacttagagacgatttaactgttagaatgctt
ggagattacagtttggtagatactaatgataaagataagcattttactttgaaagaagct
gttgaaaatttagaagaggtgctcatagaaaccacttttaaaaagtatggaaatgttaga
gcagcagccaaggagttaggcatagatgcatcaacccttgtaagaaaaagaaaaaaatat
agaagtaaaagcgattgtaaaaatagtgatacttaa
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