Clostridium carboxidivorans: Ccar_23250
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Entry
Ccar_23250 CDS
T03979
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cck
Clostridium carboxidivorans
Brite
KEGG Orthology (KO) [BR:
cck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cck03400
]
Ccar_23250
Enzymes [BR:
cck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ccar_23250
DNA repair and recombination proteins [BR:
cck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Ccar_23250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
L27_1
Motif
Other DBs
NCBI-ProteinID:
AKN33577
UniProt:
C6PNE0
LinkDB
All DBs
Position
5158950..5162396
Genome browser
AA seq
1148 aa
AA seq
DB search
MSLRFIYGRAGSGKSHFCLNDIKKRIDEGADNPLILLVPEQFSFQAEKNLIKTIGEAGML
KAQVLSFRRMAYKVLNEVGGLTKKHMNASGKSMLIYKIMEENSGKLKVFRKSVKRQGFIT
TVSDIITEFKRYDITLENLNSTLDRIENENLRNKMEDLILIFSQFEERLHKKYIDSEDDL
TILAEKMSKSHMFDEAEIWIDEFSSFTPQEYKVLDRLMDKTKRINITLCTDYLDCSSADN
STDVFLPTKSTEEKILKIVLEKNIKYDKPIALKCSPCYRFKDTKELQHLEKYLFSYPYKI
YKEKCQDISIFKALNKYTEVEDTARDIVRMCRDNGFRFKDIAVISGDLDGYESLFSAIFK
EYDIPYFIDKKRKINDNPIIMLIMSVVEILSQNWSYEAVFRYLKTGLLELTKEDMDLIEN
YVLSNGIKGNAWIKEEPWDFGLSYSFEKKEISDYEKEILNKINLIRDKIREPIIKLSKDI
KGRKKGRAICEGLYNFLCNIKLDEKVAAWIEYFKENGELDKANEYSQIWNIVMEVLDQIV
EVMGEETLAIGTFSQVLSKGFDEYEIGVIPPALDQVLIGSVTRLKSHDVSVLYIVGVNDG
VFPAALAQEGVLTDSDREILKGRGIEIAKDTRSRAFEEQFLVYTTLTTVSKYLRLSYSIA
DEGGKTKRPSIVIGRIKKIFSNVEEQSNLIEIQNDEEKLKYVTGPRATFNKLISNIKKDS
NGYITPMWLDVYRWYNKSDKWNKKLENIFNGFSYSNEAEIMDTNRVRKLYGRHLNISVSR
LEKFVNCPFSYFIQYGLNAKERKVYKLSSPDLGSFMHNVLQVFSSKLKEENLSWKEIDSE
WCEREVSEIVDEILESMPSSVFNSSKRYKHITNNAKRILNRSVWLITEHMKRGGFEPSGY
ELSFGNSGDFPPISLQLHSGETVSLIGRVDRVDSMNSEENTYLRIVDYKSGTKEFKLSDV
YYGLQMQLLIYLDAMLTELEKEMNKDAIPGGILYFKLDDPIVKTKGDIVDSEIEERIMKA
LKMNGLLLDDPDIIREMDNEIEKTSDIIPASIKKDGTLSKSFSSVATIEQFNLLRKYVRD
TIASLCEQILEGNIGVKPSKHKNGDACEYCVYPSICQFDTSLEENKYRIINDKSDEEVWN
EIENKYNK
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgagatttatatatggaagagcaggtagtggtaaaagccatttttgcttaaat
gatattaaaaaaaggatagatgaaggagcagataatcctttaattcttttagtgcctgaa
cagttctcatttcaagcagaaaaaaatcttataaaaactataggagaagccggaatgctt
aaagcacaagttttgagctttagaaggatggcatataaggtattaaatgaggtaggagga
cttacaaaaaagcatatgaatgcttcggggaagagtatgcttatttataagataatggag
gagaatagtggtaaactcaaggtttttaggaagtcagtaaaaagacaagggtttattact
acggtttctgatattataacagaatttaaaagatacgatattaccctggaaaacttaaat
agcactttagatagaatagaaaatgaaaatttaagaaacaaaatggaagatttaatatta
attttttcgcaatttgaagaaagacttcataaaaaatatattgattcagaagatgattta
actattttggcagaaaaaatgtcaaaatcgcatatgtttgatgaagcagaaatatggata
gatgaattttcaagctttactcctcaagaatataaagttttagataggcttatggataag
actaaaaggattaacataactttatgtacggactatttagattgcagctcggctgataat
agtacagatgtatttttaccaactaaaagtacagaagaaaaaattttaaaaattgtttta
gaaaaaaatataaaatatgataaaccaattgcattaaaatgtagtccttgctatagattc
aaagatactaaggaacttcaacatttagaaaaatacttattttcttatccatataaaatt
tataaagaaaagtgtcaagacataagtatttttaaggcattaaataaatacacagaagtg
gaagacacagcaagagatatagttagaatgtgtagagataatgggtttaggtttaaagat
attgcagtaataagtggggatttggatggatatgaaagtttgtttagtgcaatttttaag
gaatacgatataccttattttatagataaaaaaagaaaaatcaatgataatcctattata
atgctaataatgtctgtagtagaaatattatcccaaaattggagctatgaagctgtattt
aggtatttaaaaacaggacttttagagttaactaaggaagatatggatttaatagaaaat
tatgtgcttagtaacggaattaaaggaaatgcttggattaaagaagaaccttgggatttt
ggtttaagctatagttttgaaaagaaagaaatatcggattatgaaaaggaaattctgaac
aagataaatttaattagagataaaataagagaacctattattaaactatctaaagatata
aaaggaagaaaaaaaggaagagctatatgtgaaggactttacaattttttatgtaatata
aaattagatgaaaaggtagctgcatggatagaatattttaaggaaaatggagaattagat
aaagctaatgaatatagtcagatatggaatatagtaatggaggttttagaccaaatagta
gaagtaatgggagaggaaacgctagctattggaaccttttcacaggttttatctaaaggc
tttgatgaatatgaaataggggtaattccaccagctttagatcaagttctcattggtagt
gttacgagacttaaaagtcatgatgtatctgtattatatattgttggagttaatgacgga
gtttttccagctgcattagcccaagaaggagtgttaacagatagtgatagagagatctta
aagggaagaggaatagaaattgcaaaggatactagaagtagagcctttgaagaacaattt
ttggtgtatactaccttgaccactgtaagtaaatatttaagactaagctattctatagca
gatgaaggtggaaaaacaaaaagaccttctatagtaataggtagaattaaaaagatattt
agcaatgtggaagaacaaagcaatttaatagaaatacaaaatgatgaagaaaaattaaag
tatgtaacaggacctagagcaacctttaataagcttatatcaaatattaagaaggattct
aatggatatataacgcctatgtggctagatgtgtatagatggtacaataaaagtgataag
tggaataaaaaacttgaaaatatatttaatggtttttcatatagtaacgaagcagaaatt
atggatacaaatagggtaagaaagctttatggaaggcatttgaatataagtgtatctaga
cttgaaaagtttgtaaattgtccattttcttattttatacaatatggacttaatgcgaag
gaaagaaaagtatataaattaagttcacctgatttgggaagctttatgcataatgtactt
caagtattttcaagcaaacttaaggaagaaaacttaagttggaaggaaattgatagtgaa
tggtgcgagagagaagtttctgaaatagtggatgaaattttagaaagtatgcctagttct
gtatttaatagttctaaaagatataagcatataactaataatgcaaaaagaattctcaat
agatcagtgtggcttataactgagcatatgaaaaggggaggatttgaaccttctgggtat
gaattatcatttggtaattcaggagatttcccacctatttccctacagcttcattctggt
gaaactgtaagccttataggaagagttgatagagtagatagtatgaacagtgaggagaat
acttatttaaggatagtagattataaatctggaacaaaggaatttaagctttcagatgta
tattatggtttacaaatgcagcttttaatatacttagatgctatgctcacggaacttgaa
aaagaaatgaataaagatgctattccaggaggaattctttattttaaattagacgaccca
atagtaaagacaaaaggagatattgttgattcagaaatagaagagagaataatgaaagcc
ttaaaaatgaatggattattattagatgatcctgatattataagagaaatggataatgaa
atagaaaaaacttctgatattataccagcttccataaaaaaggatggtactttgtctaaa
tccttttcttcagttgctacaatagagcaatttaatcttttaagaaaatatgtaagggat
actatagcctctttatgtgagcaaatattagaaggtaatataggtgtgaagcctagtaaa
cacaaaaatggagatgcttgtgaatattgtgtttatccatcaatatgtcaattcgataca
tctttagaggaaaacaagtacaggataataaatgataagagtgatgaagaagtttggaat
gaaatagaaaataagtataacaaataa
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