Acetivibrio clariflavus: Clocl_0656
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Entry
Clocl_0656 CDS
T01661
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ccl
Acetivibrio clariflavus
Pathway
ccl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Clocl_0656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccl03021
]
Clocl_0656
03400 DNA repair and recombination proteins [BR:
ccl03400
]
Clocl_0656
Enzymes [BR:
ccl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Clocl_0656
Transcription machinery [BR:
ccl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Clocl_0656
DNA repair and recombination proteins [BR:
ccl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Clocl_0656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Peptidase_M23
PIN_12
Motif
Other DBs
NCBI-ProteinID:
AEV67363
UniProt:
G8LUM3
LinkDB
All DBs
Position
767822..771325
Genome browser
AA seq
1167 aa
AA seq
DB search
MAVFELSNFDSIKIGLASPEKIREWSRGEVKKPETINYRTLKPERDGLFCERIFGPQKDW
ECHCGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLL
DMSPRALEKVLYFASYVVIDPGQTPLSKKQILSEKEYRDSVEKFGSNFRAGMGAEAIKEL
LMEIDLDALAKELRSELAESTGQKRIRTIKRLEVVEAFRQSGNKPEWMILDVIPVIPPEL
RPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVRNEKRMLQEAVDALIDN
GRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKIYQCGLP
KEMALELFKPFVMKKLVNDGLAHNIKSAKRMVERVKNEVWDVLEEVIKEHPVLLNRAPTL
HRLGIQAFEPVLVEGRALKLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARFLMLSANN
LLKPQDGKPVAVPTQDMVLGSYYMTIIKEGAKGEGKVFSSMEEAVMAYECGDITLHSKIK
VRMKRVIDGVEKSKLIECTVGRLLFNEGIPQDLGFVDRSDPERVFDLEIDFLVGKNELRK
IIERSIRVHGITETAKLLDLIKEKGFRYSTKGAITIGVSDMVIPEVKAKYIKETEEKIEN
IMKQYKRGLISDEERYNSVIACWNEASENITKALINNLDRFNPVYMMSQSGARGNINQIK
QLAGMRGLMADTSGKTIEVPIKANFREGLNVMEFFISTHGARKGLADTALRTADSGYLTR
RLVDVSQDVIVRETDCGTKKGIEVSDIKDGNEVIEELSERIIGRYPAGNIVHPETGEILV
PVDHMITEKDAEKIIKSGIKKVKIRSVLTCHSEYGVCAKCYGMNLATGEECNVGEAVGII
AAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVEELFEARKPKGLAIISEINGTVKIVE
SKKKREIVVTSDDGEARNYLIPYGSRIRVMDGDHVEAGDELTEGSVNPHDILKIKGVNAV
QAYLLQEVQRVYRLQGVDINDKHIEVIVRQMLRKVKVEDAGDTNLLPGGLVDLFDFEEEN
AKAVAEGKRPAVGKRALLGITKASLATESFLSAASFQETTRVLTEAAIKGKVDPLVGLKE
NVIIGKLIPAGTGMSRYKDISISTVTE
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtttgaactaagtaattttgattcgataaaaattggtttagcttctccggaa
aagattagagaatggtcgagaggcgaagtaaaaaagccggagacaataaactatagaaca
ttaaaacccgagagagatggcctcttctgcgaaagaatatttggtccgcaaaaagactgg
gagtgccattgcggaaaatacaagagaataagatataagggaatagtttgtgaccgatgc
ggagttgaagtaacaaggtcaaaggttagaagagagagaatggggcatatagagctcgct
gccccagtatcccacatatggtattttaaaggtattcccagcagaatgggattgctgctg
gatatgtcgccaagggctcttgaaaaggttttgtattttgcatcttatgtggtaattgat
cctggccagacacccctttcaaagaagcagatattgtcggaaaaagagtacagagacagt
gttgaaaaatttggcagcaatttcagggcaggcatgggtgcagaggcaataaaagagctt
ctcatggaaattgaccttgatgctttggctaaggaattaaggtcagagcttgctgagagt
acaggacagaaaagaataagaaccataaagagattggaagttgtggaggcctttagacaa
tccggcaataaacccgagtggatgatcttggacgttatacctgtaattcctccggaatta
agaccaatggtacaattggacggtggaagatttgcaacttcagacttaaatgacttatac
agaagggttattaacagaaataacaggcttaagagacttctggatcttggagcacctgac
attattgtaagaaatgaaaagagaatgcttcaagaggctgtagatgctttgatagataac
ggaagaagaggaagaccggtaacggggcctggaaacagaccgttaaaatccctttccgat
atgctcaaaggtaaacagggacgtttcagacaaaaccttctcggaaagcgtgttgactat
tccggacgttcagttattgttgttggcccggaacttaagatatatcagtgtggattacca
aaagaaatggctttggaattgtttaaaccttttgttatgaaaaagcttgttaatgacggg
cttgctcataatataaagagtgccaagagaatggtagaaagagtaaaaaatgaagtttgg
gacgtactggaagaagttataaaagagcatcctgtacttcttaaccgtgctccgactctt
cacagacttggtattcaggcatttgaacctgtattggtagaaggtagggcacttaaactt
catccgttggtttgtacagcgtataatgccgacttcgatggagaccagatggctgtacac
gtaccattgtctgctgaggcacaggcagaagccagattcttaatgctgtctgccaataac
cttttgaaacctcaggatggaaaacctgttgctgttccaacacaggacatggttttgggt
agttactatatgaccattattaaagaaggagcaaaaggtgaaggaaaagtcttctcaagc
atggaagaagctgttatggcttatgaatgcggagatataactctccattcaaaaataaaa
gtaagaatgaaaagagttattgatggtgtggaaaaatccaagttaattgagtgcactgta
ggtagactgttgtttaacgaaggaatacctcaggaccttggatttgttgacagatcagat
cctgaaagagtgtttgatcttgaaatagattttttggtaggaaaaaatgagcttagaaaa
ataattgaaagaagtataagagtccatggtataactgagacggcaaaactgcttgactta
attaaagaaaaaggattcaggtattcaactaaaggcgccataacaataggtgtatccgat
atggttattcctgaagttaaagctaagtacattaaagaaaccgaagaaaagattgaaaat
attatgaagcagtacaagagaggtctcatatccgatgaagaaaggtacaactcggttata
gcatgctggaatgaggcatcggagaatataactaaggctcttataaataaccttgacaga
tttaaccctgtttatatgatgtctcagtcgggagcgagaggtaatattaaccagataaaa
cagttggccggtatgagaggacttatggccgatacttcgggtaaaaccattgaggttcct
ataaaggcgaatttccgtgaaggattgaacgttatggaattcttcatttcaactcacggt
gctagaaaaggtcttgccgatacagctttgagaactgctgactcgggttacctgacaaga
cgtcttgttgacgttagccaggatgtaatagtaagggaaactgattgtggaacaaagaaa
ggtatagaagtttcagatataaaagatggtaacgaggtaatagaagaactttcagaaaga
ataatcggaaggtatccggcaggtaatatcgttcatcctgaaaccggtgagatattggta
ccggttgaccatatgatcactgaaaaggatgcagaaaaaattataaagagcggaataaag
aaagtaaagataagatccgtattgacttgccactctgaatatggagtctgtgcaaaatgc
tatggtatgaatcttgcaaccggtgaggaatgcaatgtaggtgaagctgtcggtatcatt
gctgcacaatccataggtgagcctggaacacagcttacaatgagaaccttccataccggt
ggtgttgccggtgatgacatcacgcaaggtttgcctcgtgttgaagagctttttgaagca
agaaaacctaagggattagctattatatcagaaataaacggtactgtaaaaattgttgaa
tcaaagaaaaagagagaaattgtggttacatctgatgacggtgaagcaaggaattatctg
attccttacggttcaagaattagagtaatggacggggatcatgttgaagccggtgatgag
ctgacagaaggttctgtaaatcctcatgacatattgaaaattaaaggtgtaaatgcagtt
caggcatatctcctgcaagaagtacaaagagtgtacagactacagggggttgacatcaat
gataagcatattgaagttattgtaagacagatgttaaggaaagtaaaagtagaagatgcc
ggtgatacaaatctcctacccggtgggcttgttgatttgttcgattttgaagaagagaat
gcaaaagctgtggcagaaggcaagagacctgctgttggtaagcgtgcattattgggaatt
acaaaagcatcccttgctaccgaatcgttcttgtcggctgcatcattccaggaaaccaca
agagtattgacagaagcagctataaaaggaaaggtagatccattggttggtcttaaggag
aatgttattatcggtaagttgataccggcaggaacaggtatgagcaggtacaaggacatt
agcatcagtacagtgactgaataa
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integrated database retrieval system
