Acetivibrio clariflavus: Clocl_1157
Help
Entry
Clocl_1157 CDS
T01661
Name
(GenBank) RHS repeat-associated core domain protein
Organism
ccl
Acetivibrio clariflavus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
PT-HINT
F5_F8_type_C
Dockerin_1
F5_F8_type_C_2
DUF6531
Hint_2
RHS
AXH
Hint
DUF6861
Motif
Other DBs
NCBI-ProteinID:
AEV67829
UniProt:
G8LY98
LinkDB
All DBs
Position
1349492..1355887
Genome browser
AA seq
2131 aa
AA seq
DB search
MKKSKRLFSLIISCVLLLQIITSTTIFGFAESTYAEEMSETNKGLVGDVDGNGEINSIDY
AYMKMVLLGIRKDFPIEDGLWAADVNGDGNFNSIDCAYMKMYLLGRIKEFPKKNIVVTPT
STPTITATPTITPTPTAPVQTIEPIPNDVARNKIAICSSFIGEGYDADKAIDGILNSMWK
AEGFEQWIRIDLGNEYTLNKTEFVVDGNKAYKYKIEVSMDDDNYTVIVDKTSNTSESDTY
TDGFQETKARFVKLTITGVEGSLDETIGIKEFRAFRTQQEPFPSVLPMPSPIIVTDYIRP
YVTLELQTEKVSVNEKIQIKTAATDDVGVENRTLKVNGTEIALNDDGTAEYIPDTAGVYK
VEFFAQDAAGNEGYASKEFRCVTASDGTKPQASITTPEFGTYVTMPINIMGTAMDANICN
YILEYSEKGQNNYIRFAEGTTNVESGVLGTFDPNTVKSGLYDIRLTVYDKGGLSNQTVTT
VFADGKMTLRNFSIAYTDISIPVVNGMPLEMKRYYDSTNRSKGDFGYGWTSEIDGIKLVE
SCKLSEGWSKNYAMGVYFVKEDKPHYIVISYPDGKTDKFAVKLKNIYATDPLGYYSLGTE
GMGTFEVIFEPVAGTYSKLVAENMEVHIYNSLFGNKFGLWKYFIDEFSDEVYSPGKYTLT
TQDGKVIKFNSSGKVESITDSYGVKITPQTDGLLYTRGSVTKKLSYTKADGVIKSASDLE
NNSVIYEYDKYGDLVSITDLENHKTKFVYDSEHRIIKVINSNNEVITRNVYDEAGRLVYI
YDAAGRRSEFTQQTVDSKEVITFTDRRNNPTVYTFNADGNLESVMDAAGYTTTYTYKDNG
LVDTITGPKGSFKYDYEMNSNGTIKKVRITDEAENYMECNYDAKGKIDTISDYSNTALNL
LDNDYDNYGRLVKTKDGNGGTISLKYDSSGRVESVTDQMNKEILKLYYDNVTGNLASYTD
ANNTVTTFGDYDANGRWRRAEFTRTVSEGITEVVTTINVYDNMGRIVENIDGAGRVSSVS
YNGIGKIDTFTDKYNNTVEYKYDCLGNLAEVIYQDGSSEKYTYDEEGNVTSYTDRNSKTT
YYTYDAMNRLESIVYQDGSTVKYEYNGAGDIKKVTDQRGNVTEYQYDSLGRLEYVFNSAK
PEDKIQYIYSNKPYPDEMVDGKGNRFVYSYNANGQLEKIKYSDNTTFEIEYDAAGRISTV
KDQNEKVTKYDYDAAGNLEKVTLAYGIEGKEEVWSYDYDEAGNLTSITDPRGKVTKMEYD
NVGRLKKQILPMKMNLEADYNDDEREVTVTDYNKNSIVYKYDDNLRLCIKETGDGNTVYF
EYTNEGYVKKVIDKNGTTSYEYDDLHRLIKKTNPDNSTVEYFYDWAGNCTGIKTKGGATS
YVYDVYNRLSKVISRDNKTTRYMYDAVGNLEYVLYPDGYKIQYVYDDQNRLTDIYRIKPD
GETVEYSYHYELGYAGERKKVTESSGRIVVYTYDDCYRLKEEKITDPLLGNRVISYEYDK
AGNRIEKNDNGIITVYEPDDNNRIRSAGSVKYDYDDNGNLKSKVDGNIVTTYQYDAENRL
ISVTETESGVLTNVETYEYDWEGNRISKTTNGVVTKYLVDSLGLSRVIEERDGNGNLLAY
YTYGNELISQTRNGVTSYFQYDGLGNVRRLTDEEGNVTDTYVYDAFGNILNRTGTTVNSY
MFAGEQYDANTGFYYLRARYMNPALGNFISMDPYSGSIYDPTSLHKYLYANASPVNFTDP
TGYFTIPEILASFQIHGVMNTLRCVALSSLLNAAKGGIAGAVFGGIDAALGGRDIVEGVM
QGTISGAAFGALATFAELRLILGVFGLENGVEGVFEAIEEGDYDLAAWRAVTTIAALISL
GSELFNRSACFTEETLIYTKDGYKEIKDIQVGDEVYSENPETGEKGLKRVLNVFVNEIKE
LVHLKVGDQEIKTTSTHPFWVEGKGWVDAGELKPGDRLVMYSGEVLEVDEAYVEYLDRSV
KVYNFEVEDWHTYFVSEYNVFVHNTVCGDSRVGNTQGSSKRITNRNGRKGGEAHQSVVNN
IKASNASGKIVREHYFRTPGGTKNYRFADAVEMVNGNIKRIYQVGKVNKNGLPVLRESLA
IYDIMNSPKYNGAPIYFLPYNANIGPIIYTY
NT seq
6396 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagagtaaaagactattttctttgatcatttcctgtgtgttattgctacaaata
ataacatccactactatatttggttttgctgaatcaacttatgctgaagaaatgtcggaa
accaataaagggctggtgggtgacgttgacggaaatggggaaattaatagtattgactat
gcctatatgaaaatggtacttcttggaataagaaaagattttccgatagaagacggttta
tgggcagcagacgttaacggtgatggcaattttaacagtattgattgtgcatacatgaaa
atgtatttgcttggcagaattaaggaatttccaaagaaaaatattgtagtaacacctact
tcaacaccaacaataactgccacaccaactataacaccaacaccgacagctcctgtacaa
acaatcgagccaatacccaatgatgtggcaagaaataaaattgcgatatgttcatctttt
ataggggaaggctatgatgctgacaaagctattgacggaatactgaattccatgtggaaa
gcagaaggttttgaacagtggatcagaattgatttgggaaatgaatatacactgaataaa
accgagtttgtagttgatggaaacaaagcttataagtacaaaattgaagtttcaatggat
gatgacaattacactgttatagttgataagacatccaatacttctgaatctgatacatac
accgacggtttccaggagacaaaggcaaggtttgtgaagcttacaataacaggtgttgaa
ggaagtcttgatgaaactattggaataaaggagtttagagcattcagaacacagcaggag
ccattcccttcagtattacctatgccatctccaataattgtgacagactacataaggccc
tatgtaacactagaactccagactgagaaagtatctgtgaacgagaaaattcaaataaaa
actgcagcaaccgatgatgtgggagtcgaaaacaggactttaaaagtaaacggaactgaa
attgcattgaatgatgatggaacagcagagtatataccggatacagccggagtatataaa
gttgagttttttgcacaggatgctgccggcaatgaaggatatgcttcaaaagagtttcga
tgtgtgacggcttctgatggtactaaacctcaggcatcaataacaacaccggagttcgga
acttatgtaactatgccaataaacataatgggaacagcaatggacgcaaatatatgcaat
tatatattggaatatagtgaaaaaggtcaaaacaactatatacgcttcgctgaaggtaca
accaatgttgaatccggagttctggggacctttgatcccaataccgtaaaaagcggtttg
tatgatataagacttactgtatatgataagggaggtctatcaaaccagactgttactact
gtttttgcagacggtaaaatgacattgagaaactttagtattgcatatacggacatttcg
atacctgttgtaaatggaatgcctttggaaatgaaaaggtattatgacagtaccaacaga
agcaagggtgattttggctatggctggacttccgaaatagacggcataaaacttgtggag
agctgtaagctgtcagaaggctggtctaaaaattatgcaatgggtgtttattttgtcaag
gaagataagccgcattatattgtaatttcctatcctgatggaaagactgataaatttgca
gtcaagctcaagaatatctatgcaaccgatcctttgggctattatagcttaggtaccgaa
ggaatgggtacttttgaagtgatattcgagcccgttgccggaacttattcaaagcttgtg
gctgagaatatggaagtgcatatatacaacagcttgtttggcaacaaattcggtttatgg
aagtacttcatagacgaattttctgatgaagtctacagtccaggtaaatacaccttgaca
acccaggacggaaaggtaataaaattcaattcttcaggaaaagtagaaagcattaccgat
tcctatggtgtcaaaatcactcctcaaacagatggactcttgtatacaaggggttctgtt
acaaagaagctaagttatacaaaggctgacggagttattaaaagtgcatcggatttggaa
aataacagtgtaatatacgaatatgacaagtatggagatctggtttcaattaccgatttg
gaaaatcataagacaaaatttgtttatgacagtgagcacaggataataaaagtgattaat
tccaataatgaagttataacccgaaatgtatacgatgaggcgggaagacttgtctatatc
tacgatgctgccggcagaaggagtgagtttacgcagcagacggtggattcaaaagaggtc
ataacctttaccgatagaagaaataatcccactgtttatacctttaatgccgatggtaat
ctggaaagtgtcatggatgcggccggttacaccacaacttatacatacaaggacaatggg
ctggtggataccattacaggccctaagggaagctttaaatacgattatgaaatgaattcc
aacggcacaataaagaaagtcaggattaccgatgaagctgaaaactatatggagtgtaac
tatgatgccaaaggtaagatagatacaatatccgactattccaatacggcgctgaattta
ttggacaatgactacgataactacgggagattggtgaagacaaaggacggaaacggcggc
accataagcttgaaatatgattcatccggccgggttgaatcggttaccgatcagatgaac
aaagagatacttaaactatattatgacaatgtaaccggaaacttggcttcatataccgat
gcaaacaatactgtgacaacttttggcgactatgatgccaatggaagatggagaagggca
gagtttaccaggacagtaagtgaaggaattactgaggtagtgactacaataaacgtttat
gacaacatgggacgcatagttgagaatattgacggtgcaggaagggtttcaagtgtatcc
tacaatggaataggaaaaatagatacttttaccgacaaatataataacacggtggaatat
aaatatgactgccttggaaatctggcagaagtgatttaccaggacggaagcagtgaaaaa
tacacctatgacgaagaaggtaatgtaacttcctataccgacaggaattccaaaactaca
tactacacctacgatgccatgaaccgcttggaaagcattgtataccaggacggttccaca
gtaaaatatgagtacaatggtgccggagacataaaaaaggtgaccgaccagaggggaaat
gttaccgagtatcaatatgacagcctgggtagactagaatatgtctttaattcggcaaaa
cctgaggataagattcaatacatctacagcaacaaaccctatcccgatgaaatggtggat
gggaagggcaatcgatttgtatacagttataatgccaacggacagttggaaaaaataaaa
tactccgataacaccacttttgagattgagtacgacgcggcaggaagaatttcaacagta
aaagaccagaatgagaaagttacaaaatatgattatgatgcagcaggaaatcttgaaaag
gttactttggcctatggcatagaaggtaaggaagaagtttggagttatgattacgatgaa
gctggaaatttaacaagcataaccgaccctaggggcaaagtgacaaaaatggagtatgac
aacgtgggaaggctgaaaaaacagatccttcctatgaagatgaacttagaggctgattac
aatgacgacgagagggaagtaaccgtaaccgattacaataaaaattcaattgtatataaa
tacgacgataacttaaggctttgcataaaagaaacaggggacggaaataccgtttacttc
gaatataccaatgaggggtatgtaaagaaagtcatcgataaaaacggcacaacaagttat
gaatatgatgacctgcaccgactgataaagaaaacaaacccggacaacagtaccgtggag
tatttctacgactgggcaggcaattgtaccggaataaagacaaaaggcggagcaactagc
tatgtatacgatgtatacaaccgcctgagcaaagtaatttcaagggacaataaaacaacc
cgatacatgtatgatgccgttgggaaccttgagtatgtattgtatcctgacgggtataag
atccaatacgtttatgacgatcaaaacaggctaaccgatatatataggataaaaccggat
ggagaaacggtagaatactcataccactatgaattaggctatgccggagaacggaaaaag
gtaacggaaagtagcgggcgtatagtggtatatacttatgatgattgctacaggctaaag
gaagaaaaaataaccgatccattgcttggaaatagagtaataagctatgaatatgacaag
gcgggcaacaggattgaaaagaacgacaatggaataataaccgtttatgagcctgatgac
aataacaggattagaagtgcgggcagcgttaaatacgattatgatgacaacggaaactta
aaatccaaagtagacggaaatattgtaaccacttaccaatatgatgccgagaaccggttg
atatcggtgaccgaaaccgaatccggggtgttaacaaatgttgaaacctatgaatatgac
tgggaaggcaaccggataagcaaaactaccaacggagtggttacaaaatacctggtagac
agccttggtctttcccgcgtgattgaagagcgagacggaaatggcaatctgctggcatac
tacacctatggaaatgagctgataagccagacaagaaatggtgtaacaagctacttccag
tacgacggccttggaaatgtaagaagactcaccgatgaagagggcaatgtaaccgataca
tatgtatatgatgccttcggtaatatacttaacagaaccggaacgacagtgaacagctac
atgtttgcgggtgagcaatacgacgcaaacaccggattctactacttaagggcaaggtac
atgaaccctgcattgggcaatttcataagcatggacccgtacagcggaagtatttatgac
ccgacaagcctgcacaagtatctgtatgccaatgcaagtcctgtgaacttcaccgacccg
acgggatatttcaccataccggaaattctggcatccttccagatacatggagttatgaac
acactaaggtgtgtagccctatcatcattgctaaatgcagcaaaaggtggaattgcaggt
gcggtattcggaggaatagatgcagccttaggcggaagagacatagtggaaggagtaatg
cagggaacgataagcggtgccgcttttggggcattggctacgtttgcagagttaaggctg
atattgggagtattcggtttagagaacggagtagaaggagtatttgaggcaatagaagaa
ggcgattatgaccttgctgcatggagagcagtaacaacaatagctgcattaatatcattg
ggcagtgaactgtttaacagatcagcatgctttacagaagagacactgatatatacaaaa
gacggatacaaagagataaaggacatccaggttggagatgaggtatactctgagaatccc
gagacaggagaaaagggattaaagagggtactgaacgtatttgtaaatgaaataaaagaa
ctggtacacttaaaagtaggagaccaggagataaagacaacatcaacccatcccttctgg
gtggaaggaaaaggctgggtagatgccggagagttaaaacccggtgacaggcttgtaatg
tactcaggcgaagtgcttgaggtggatgaagcctatgtagagtatctggataggtctgta
aaggtgtataattttgaagtagaagactggcatacctactttgtgtcggagtataatgta
tttgtacacaatacagtatgcggcgactcaagagttggaaatactcagggaagttctaag
cgcataactaatcgaaatggaagaaaaggtggtgaagctcatcagtcggtagtaaataat
ataaaagcttctaatgcatcgggaaaaattgtacgtgaacattattttagaacgccagga
gggacaaaaaattatagatttgcagatgcagtagagatggttaatggaaatattaaaaga
atatatcaggttgggaaagttaataaaaatggattaccggtgctaagagagtctcttgct
atttatgatataatgaattctccgaaatacaatggagcacctatatattttctaccctat
aacgcaaatataggtcctataatttatacatattag
DBGET
integrated database retrieval system
