Acetivibrio clariflavus: Clocl_1224
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Entry
Clocl_1224 CDS
T01661
Name
(GenBank) Holliday junction endonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
ccl
Acetivibrio clariflavus
Pathway
ccl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Clocl_1224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccl03400
]
Clocl_1224
Enzymes [BR:
ccl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Clocl_1224
DNA repair and recombination proteins [BR:
ccl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Clocl_1224
RecFOR pathway proteins
Clocl_1224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF4300
Pox_A22
DUF460
Motif
Other DBs
NCBI-ProteinID:
AEV67885
UniProt:
G8LYY3
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All DBs
Position
1409354..1409848
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AA seq
164 aa
AA seq
DB search
MIILGIDPGFAITGYGIVKYEGNKFSAIDYGAITTASTMDLPKRLLHLHDSLEKLIHEYK
PDAIAIEELFFNKNIKTALTVGHGRGVAVLTAAKSGVEVFEYTPLQVKQSVVGYGRAEKV
QVQQMVKIILNLPEIPKPDDVADALAIAICHGHSYKMSGLFKTT
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgataatattaggtattgaccctgggtttgcaataacgggttacggtatagtaaaatat
gagggaaacaagtttagcgccatagattatggggcaattactacagccagtacgatggat
cttcctaaaagacttttgcacttgcatgattcactggaaaaattaatacatgaatataaa
ccggatgcaatagccattgaggaactgttttttaacaaaaatataaaaaccgcccttact
gtaggacatggcaggggagtagcggttttaaccgcagccaaaagcggtgtagaggttttt
gaatatactcctcttcaggtaaagcagtcggtggtaggttacggaagggcggaaaaagtg
caggtgcagcaaatggtaaagattattttaaaccttcctgaaatacctaagcctgatgat
gtggcagatgcattggctattgcaatatgccacggtcattcttataaaatgtcaggactc
ttcaaaactacctga
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