KEGG   Acetivibrio clariflavus: Clocl_1226
Entry
Clocl_1226        CDS       T01661                                 
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
ccl  Acetivibrio clariflavus
Pathway
ccl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ccl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Clocl_1226
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccl03400]
    Clocl_1226
Enzymes [BR:ccl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Clocl_1226
DNA repair and recombination proteins [BR:ccl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Clocl_1226
    RecFOR pathway proteins
     Clocl_1226
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_16 nSTAND3 AAA_22 TsaE RNA_helicase AAA_14 DUF815 AAA_24 AAA_3 NTPase_1 IstB_IS21 NB-ARC AAA_18 Sigma54_activat Rad17 Bac_DnaA AAA_2 AAA_17 Sigma54_activ_2 AAA_28 ABC_tran Parvo_NS1 NACHT AAA_25 NPHP3_N AAA_33 RsgA_GTPase ATPase_2 AAA_11
Other DBs
NCBI-ProteinID: AEV67887
UniProt: G8LYY5
LinkDB
Position
1410766..1411758
AA seq 330 aa
MEDRIVGSRAKEEDIDEASLRPRKLSEYIGQNKVKENLTVFIEAAKKRNEALDHVLLYGP
PGLGKTTLANIIASELGVNIRVTSGPAIEKPGDLAAILTNLGNYDVLFIDEIHRLNRSVE
EILYPAMEDYALDIIIGKGPSARSIRLDLPKFTLIGATTRAGLLTSPLRDRFGVINKLEM
YTPEELKLIVERSAQILGIKIESEAAEEIARRSRGTPRIANRILKRVRDFAEVKGKGLIT
KEIAIMSLDALEIDPIGLDGVDRNLLFSIIDKFAGGPVGLETLAATTGEEANTIEDVYEP
YLLQLGFINKTPRGRVATKLAYEHFGLRYE
NT seq 993 nt   +upstreamnt  +downstreamnt
atggaagacagaattgttggcagtagggcgaaggaagaggatatcgatgaggcaagcctt
aggccaagaaaattaagtgaatatataggtcagaataaagtaaaggaaaatctcacggtg
tttatagaggctgccaaaaaaagaaatgaagcccttgaccatgtgttgctgtatggacct
ccgggtcttggaaagactacccttgccaatataatagcatcggaactgggagtgaatata
agagttacatccggacctgccattgaaaaaccgggagatcttgcggccatattaactaac
cttggaaattatgatgtactttttatagatgaaattcatagactcaatcgcagtgttgaa
gaaatactatatccagccatggaagattatgctttggatattataatcggcaaaggccct
agtgcaagatctattaggctggatttacccaagtttacccttattggggcaactaccagg
gcaggacttttaacttcgcctttaagggacaggttcggagtgataaacaagcttgaaatg
tatactccggaggagttaaagttaattgttgaaagatcggcccaaatattggggataaaa
attgaaagtgaagcggctgaggaaatagccagacgttccagaggtactccaagaatagca
aatagaatacttaagagagtgagagattttgccgaagtaaaagggaagggattgataact
aaagaaattgccattatgagccttgatgcccttgaaattgaccctataggtttggatggg
gttgacagaaatttgctgttcagtattattgacaaatttgcaggcggacctgtaggttta
gaaaccttagctgctactacgggcgaggaggcaaataccattgaagatgtatatgaacct
tatttacttcaattagggtttattaacaagacaccaaggggaagggttgctacaaagctt
gcctatgagcatttcggtttaaggtatgagtag

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