Acetivibrio clariflavus: Clocl_1226
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Entry
Clocl_1226 CDS
T01661
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ccl
Acetivibrio clariflavus
Pathway
ccl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Clocl_1226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccl03400
]
Clocl_1226
Enzymes [BR:
ccl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clocl_1226
DNA repair and recombination proteins [BR:
ccl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Clocl_1226
RecFOR pathway proteins
Clocl_1226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
nSTAND3
AAA_22
TsaE
RNA_helicase
AAA_14
DUF815
AAA_24
AAA_3
NTPase_1
IstB_IS21
NB-ARC
AAA_18
Sigma54_activat
Rad17
Bac_DnaA
AAA_2
AAA_17
Sigma54_activ_2
AAA_28
ABC_tran
Parvo_NS1
NACHT
AAA_25
NPHP3_N
AAA_33
RsgA_GTPase
ATPase_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AEV67887
UniProt:
G8LYY5
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All DBs
Position
1410766..1411758
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AA seq
330 aa
AA seq
DB search
MEDRIVGSRAKEEDIDEASLRPRKLSEYIGQNKVKENLTVFIEAAKKRNEALDHVLLYGP
PGLGKTTLANIIASELGVNIRVTSGPAIEKPGDLAAILTNLGNYDVLFIDEIHRLNRSVE
EILYPAMEDYALDIIIGKGPSARSIRLDLPKFTLIGATTRAGLLTSPLRDRFGVINKLEM
YTPEELKLIVERSAQILGIKIESEAAEEIARRSRGTPRIANRILKRVRDFAEVKGKGLIT
KEIAIMSLDALEIDPIGLDGVDRNLLFSIIDKFAGGPVGLETLAATTGEEANTIEDVYEP
YLLQLGFINKTPRGRVATKLAYEHFGLRYE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaattgttggcagtagggcgaaggaagaggatatcgatgaggcaagcctt
aggccaagaaaattaagtgaatatataggtcagaataaagtaaaggaaaatctcacggtg
tttatagaggctgccaaaaaaagaaatgaagcccttgaccatgtgttgctgtatggacct
ccgggtcttggaaagactacccttgccaatataatagcatcggaactgggagtgaatata
agagttacatccggacctgccattgaaaaaccgggagatcttgcggccatattaactaac
cttggaaattatgatgtactttttatagatgaaattcatagactcaatcgcagtgttgaa
gaaatactatatccagccatggaagattatgctttggatattataatcggcaaaggccct
agtgcaagatctattaggctggatttacccaagtttacccttattggggcaactaccagg
gcaggacttttaacttcgcctttaagggacaggttcggagtgataaacaagcttgaaatg
tatactccggaggagttaaagttaattgttgaaagatcggcccaaatattggggataaaa
attgaaagtgaagcggctgaggaaatagccagacgttccagaggtactccaagaatagca
aatagaatacttaagagagtgagagattttgccgaagtaaaagggaagggattgataact
aaagaaattgccattatgagccttgatgcccttgaaattgaccctataggtttggatggg
gttgacagaaatttgctgttcagtattattgacaaatttgcaggcggacctgtaggttta
gaaaccttagctgctactacgggcgaggaggcaaataccattgaagatgtatatgaacct
tatttacttcaattagggtttattaacaagacaccaaggggaagggttgctacaaagctt
gcctatgagcatttcggtttaaggtatgagtag
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