Acetivibrio clariflavus: Clocl_1406
Help
Entry
Clocl_1406 CDS
T01661
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ccl
Acetivibrio clariflavus
Pathway
ccl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Clocl_1406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccl03019
]
Clocl_1406
Messenger RNA biogenesis [BR:
ccl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Clocl_1406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Intein_splicing
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
AEV68057
UniProt:
G8M181
LinkDB
All DBs
Position
1620074..1621660
Genome browser
AA seq
528 aa
AA seq
DB search
MCAIQLLIGLGIGLLIAAVGIIVASGISSRKGFQKGFEERKRRAEAEIGSAEQEAKRIIS
EAQKAAESKKREVLLEAKEEIHKSRVELDREIKDRRNEIQRQERRLVQKEETLDKKVEAL
EQKEEMLNRKSKEIDELYEKTLEVQKQQIEELERISGMSVEEAKVVLLKNVEDEVKHEMA
MLIKEIEQKAKEEADTKAKNIVALAIQKCAADHVSEVTVSVVPLPNDEMKGRIIGREGRN
IRTLETLTGIDLIIDDTPEAVILSGFDPIRREVARITLEKLILDGRIHPARIEEMVEKAK
KEVENTIRQEGDNATFETGVHGLHPELVKLLGKLKYRTSYGQNVLSHSIEVAHLAGIMAA
ELGVDVALAKRAGLLHDIGKAVDHEVEGSHVTIGADLAKKYKESNEVVSAIAAHHGDVEA
TSIIAVLVQAADSISAARPGARRESLESYIKRLEKLEEIANSFQGVEKCYAIQAGREVRI
MVKADEVQDNEIPLIARDIVKRIENELDYPGQIKVNVIRETRYIEYAK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
gtgtgtgccattcaattattaattggtttaggaattggattactaatcgcagcagttgga
ataattgttgcttcaggaataagttcccgaaaaggattccagaaaggattcgaagaaaga
aaaagaagagccgaagctgaaattggcagcgctgagcaagaagcaaagagaattataagt
gaggcccaaaaggccgctgagagtaaaaagagagaagtgctgctggaagctaaggaagag
atccacaagagcagagttgagcttgatagggagataaaagacagaagaaacgaaattcag
agacaagaacggagattagtacagaaagaagagactttggacaaaaaggttgaagcattg
gaacagaaagaggaaatgctgaacagaaaaagcaaagagatcgatgaattgtatgaaaaa
actcttgaagttcaaaagcagcaaatcgaagaattggaaagaatatcgggaatgtcggtt
gaagaagcaaaggtagtgttattaaagaatgtagaagacgaagttaagcatgaaatggca
atgctcattaaagaaattgagcaaaaagcaaaggaagaagccgatacaaaagcaaagaat
atagttgcacttgcaatacaaaaatgtgcagccgaccatgtatcagaagttacagtttct
gttgttccacttcctaatgatgaaatgaagggtaggattatcggtcgtgaaggaagaaat
atcaggactcttgagacgttaacaggtatcgatttgattatcgatgatactccggaagcg
gttatattgtccggatttgatccgataagaagagaagttgccagaataactttagagaaa
ctgatacttgacggaagaatccatcctgccagaattgaagaaatggtggaaaaagctaaa
aaagaagttgaaaacaccattcgtcaggaaggtgacaacgctacttttgaaacaggtgtg
cacggcttacatcctgagcttgtaaaattactgggtaaattgaagtataggaccagttat
ggtcagaacgttctcagtcactccattgaagttgcgcatttggccggaattatggctgcg
gagcttggagttgatgtagctttagcaaagagagcaggtttgttgcatgatataggaaaa
gctgttgaccatgaggttgaaggttctcatgtaacaattggtgctgatcttgctaaaaag
tataaggaaagcaatgaagttgtgagtgcaatagctgcacatcacggtgatgtagaagct
acaagtattattgcagttttagttcaggcagccgattcaatttcagctgcaagacctggt
gcaagaagagaatctctggagtcttatattaaaagacttgagaagttggaagaaattgcg
aattccttccagggtgttgaaaagtgttatgcaattcaagcaggaagagaagtacgtatt
atggttaaagccgatgaagtacaggataatgagattcctttgattgcaagggacattgtt
aagagaattgaaaatgaactggattatccaggacaaattaaagtaaatgttataagagaa
acaagatatattgagtatgcaaaataa
DBGET
integrated database retrieval system
