Acetivibrio clariflavus: Clocl_1742
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Entry
Clocl_1742 CDS
T01661
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ccl
Acetivibrio clariflavus
Pathway
ccl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Clocl_1742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccl03400
]
Clocl_1742
DNA repair and recombination proteins [BR:
ccl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Clocl_1742
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
IntS14_C
AAA_27
AAA_14
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AEV68352
UniProt:
G8LTA5
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Position
1989458..1992076
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AA seq
872 aa
AA seq
DB search
MATLTPMMQQYMDIKKQYEDCILFFRLGDFYEMFFTDAEIASKELEITLTGKDCGLEERA
PMCGVPFHSADSYICKLINKGYKVAICEQVEDPATAKGIVKRDVIRIVTPGTVTDSAMLD
DKKNNYLMSLYKYKNFFGIAFVDITTGDFTSTSIIIGNTIGKLMDEIARFSPSEIVANGE
FLKDENLVKAVKTRFNTYISTIEDKYFEIGYAMDKFKSYFSDHEICENEFDIYINASGAL
LEYLEQTQKVNLNHIQSFNKYKIEEYMILDAATRRNLELTETMREKNRKGSLLWVLDRTM
TSMGGRTLRKWIEQPLINIYDIRDRLNAVREFKDKFMVRMEVRELLKRVYDIERLMGKIV
LGSANCRDLISLKNSLGQIPYIKSLLKDLNESLNRECDRDIDSLDDVYEIIDRAICDDPP
VSVKEGGIIKEGYNKEVDELRRASVDGKSWLVELENREREKTGIKNLKVGFNKVFGYYIE
VTKSYFSLVPPNYIRKQTLANCERYITEELKEIEEKVLGAEDRLVELEYQLFVEVRSKVA
SEINRIKRTAKALAQIDVICSLAEVADRESYTMPEVNNEDVIHIIDGRHPVVEKVIDQGA
FVPNDTYLDMAENQIAIITGPNMAGKSTYMRQVALIVLMAQIGSFVPAKSAVIGIADRIF
TRVGASDDLAAGQSTFMVEMSEVANILNNATSKSLLILDEIGRGTSTYDGLSIAWSVIEH
ISDKKKIGARTLFATHYHELTELEGSIDGVKNYCISVEEKGEDIIFLRKIIRGGADNSYG
VQVARLAGVPAPVINRAKEILKELEESDINKRDARFKRAMKPIEGQIDVFSFNAQQRSYD
EVLKELRSIDVTTLTPLDALNILYNLQKKVNT
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggcaacactgacacctatgatgcagcagtatatggatataaagaaacagtatgaagat
tgtattcttttttttagattaggggatttttatgaaatgttctttactgacgcggaaatt
gcctcgaaagaacttgaaataacccttacaggtaaagattgcggtttggaagaaagggca
cctatgtgtggagtgccttttcattctgccgattcctatatatgcaaacttattaataaa
ggctataaggtggctatctgcgagcaggtagaagatcctgcaacggcaaagggcattgtt
aaaagggatgttataagaattgttacgccgggtactgttacagactcggctatgttggat
gataagaagaataattatctcatgtctttatataaatataaaaactttttcggtattgct
tttgtagatataacaaccggtgattttacatctacttcaataataatcggaaatacaatc
ggcaagcttatggacgaaattgcccgtttttcgccttccgagattgtggctaacggtgaa
tttttaaaggatgaaaatttggttaaggctgttaaaacgaggtttaatacatatatttcc
acgattgaagataaatatttcgagattggctatgccatggataaatttaagtcatatttc
agtgaccatgaaatatgtgagaatgaattcgatatttatataaatgcctccggggcgctt
ttagagtatcttgaacagactcaaaaggtaaatcttaatcatattcagagttttaacaaa
tacaaaattgaagaatatatgattttggatgcggcaacaagaagaaatcttgagcttacc
gagaccatgagggaaaagaacagaaagggttctttgctgtgggttttggacaggacaatg
acctccatgggaggaagaaccctaagaaaatggatagaacagccccttatcaatatttat
gatataagggacagacttaatgccgtcagggaatttaaggacaagttcatggtcaggatg
gaggtaagggaacttttaaaaagggtttacgatatagaaaggcttatgggtaagatcgtg
ctgggcagtgccaattgccgggatcttatctcattgaagaactccttaggacagatacct
tatataaaatctcttttaaaagatcttaatgaaagtctgaacagggaatgtgaccgtgac
atcgattccctcgatgatgtttatgaaattatcgatagggcgatatgtgatgaccctcct
gtgtctgtaaaagagggaggaattattaaagaaggctataataaagaagttgacgagcta
agaagggcatcggttgacggaaagagctggcttgttgaacttgaaaatcgagaacgtgaa
aaaacaggaataaagaatttaaaagtaggatttaataaagtattcggctattatattgaa
gtaacaaagtcctatttttccctcgttccacccaattatataagaaagcagactttggct
aattgtgaaagatacataactgaagagcttaaggaaattgaggaaaaggttttgggtgcg
gaggacaggcttgttgaacttgaataccagctatttgttgaggttagaagcaaagtggcc
tctgagataaacaggattaaaagaacagcaaaagctttggcacaaattgatgtgatatgt
tcattggcagaggtggctgaccgcgaatcctataccatgccggaagtgaacaatgaagat
gtgattcatataattgacggaagacatccggttgtagaaaaggtgattgaccagggtgcc
tttgtacctaatgatacatatctcgatatggctgaaaatcaaattgccataataacggga
ccaaatatggccggtaaatccacctatatgcgccaggttgctttaattgtgctgatggcc
caaataggaagttttgtacctgcaaaaagtgcggttattggaattgccgacaggatattt
accagggtaggggcttctgacgatcttgctgccggtcagagtacgtttatggtggaaatg
agtgaagttgcaaatattttaaacaatgccacttcaaaaagtcttttgatattggatgaa
atcggaagaggaaccagtacctatgacggccttagcatagcctggtctgttatagaacac
atcagtgacaagaaaaaaataggtgcaagaaccctatttgctactcactatcatgaactc
accgaacttgaaggttctatagacggtgttaaaaattactgtatatcggttgaagaaaaa
ggcgaggatataatatttttacggaaaataatccgaggcggtgccgataacagctatggc
gtacaggttgcaagactggctggtgttccggcaccggtgataaacagggcaaaggaaatt
ttaaaggaacttgaagaatcggatataaacaagagggatgcacggtttaaaagagctatg
aagcctattgaaggtcaaattgatgtgttttccttcaatgctcagcaaagaagttatgat
gaagttttaaaagagttaagaagtattgatgtaactacccttacacctcttgatgctttg
aatatattgtataatttgcagaagaaagttaatacttaa
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