Acetivibrio clariflavus: Clocl_1972
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Entry
Clocl_1972 CDS
T01661
Name
(GenBank) DNA topoisomerase I, bacterial
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccl
Acetivibrio clariflavus
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccl03032
]
Clocl_1972
03400 DNA repair and recombination proteins [BR:
ccl03400
]
Clocl_1972
Enzymes [BR:
ccl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Clocl_1972
DNA replication proteins [BR:
ccl03032
]
Prokaryotic type
DNA Topoisomerases
Clocl_1972
DNA repair and recombination proteins [BR:
ccl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Clocl_1972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
EIF_2_alpha
Tmemb_55A
Motif
Other DBs
NCBI-ProteinID:
AEV68574
UniProt:
G8LVI5
LinkDB
All DBs
Position
complement(2264369..2266465)
Genome browser
AA seq
698 aa
AA seq
DB search
MADKLVIVESPAKAHTISKFLGKDYKIIASVGHVRDLPKSQMGVDIENNFEPKYITIRGK
GDVISKLKKEAKNAKKIYLATDPDREGEAISWHLAYLLNIDSKEKCRVTFNEITKNAVKN
AMKEPREINLDLVNAQQARRILDRIVGYKISPILWKKVKKGLSAGRVQSVATRLICDREE
EIEKFVPEEYWTIDAVLQKKDEKGSFNAKFYGKDGKKMELKSEDDVKRILENIKGKPFIV
QKIKKGEKKKSPAPPFITSTMQQEAARKLGFSTKKTMIVAQQLYEGIDIKGVGALGLVTY
IRTDSTRISDEAQQDVIQFIKEKYGEKYLPTEKRVFKNKNASQDAHECIRPSQVNMDPDS
IKDSLTKDQYKLYKLIWSRFVSSQMASAEYDTISTDITIGDYTFKANGQMLKFPGFTVLY
QESKDEEGEEKENDIPDLIEGEELKQKKIEPKQHFTQPPPRYTEASLVKTLEEKGIGRPS
TYAPIITTILARGYVVKDGKTLMPTELGKIVNDIMKTYFQDIVDVEFTAQLEKKLDDIEE
GYKKWVDVMQSFYSPFAKVLEEAEEKIGNVEVPDEVTDEICEKCGRNMVIKMSRFGKFLA
CPGFPECRNARPILEEAGVKCPKCGGKVYIKKSKKGKKYLGCENNPTCSFMSWDMPSKES
CPKCGNFLLKKYLGKKVQLKCSNEECDFIKDGERKKEE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagttggttatagttgagtctcctgcaaaagctcatacaattagcaagttt
ttagggaaggattataagataatagcttctgtaggacatgtaagggatttgccaaaaagt
caaatgggtgtggatatcgaaaataattttgaaccgaagtatattactatcaggggtaaa
ggagatgttatctccaagttaaaaaaggaagcaaaaaacgccaaaaagatttatctggca
actgaccctgatagggaaggagaagctatatcatggcatttggcttatttgttgaatata
gatagcaaagagaaatgtagagtgactttcaatgaaattactaaaaatgcagttaaaaat
gcaatgaaagagcccagagagattaacttagaccttgttaatgctcaacaggccagaaga
atattagacagaatagttggttacaagataagtccaatactttggaaaaaggttaagaag
ggactcagtgctggaagagttcaatcggttgctacaagattgatctgtgacagggaagaa
gaaattgaaaaatttgttcccgaagagtattggacaattgatgccgtacttcaaaagaaa
gacgaaaagggttcgtttaatgccaagttttacggtaaagacggcaaaaagatggaactt
aaaagtgaagacgatgtaaaaagaatacttgaaaatattaagggaaagccatttattgtg
caaaaaataaaaaagggagagaaaaagaaatctcctgcgcctcctttcattacaagtaca
atgcagcaggaagcggcgcgaaaattgggatttagtactaaaaagaccatgattgttgct
cagcagctttatgaaggtatagatataaagggagttggcgcattaggtcttgtgacctat
atccgtaccgattccacaaggatttccgacgaggcgcagcaggatgttatacaatttatt
aaggaaaaatacggagagaaatatcttcctacagaaaaaagggtatttaaaaataaaaat
gcttcccaggatgcccatgaatgtattagaccgtcacaagtcaatatggatcccgattca
ataaaagattcccttacaaaggatcaatacaagctctacaagcttatttggtcaagattt
gtatcgagtcagatggcatccgcagaatacgatacaataagcactgacatcacaattggt
gactatactttcaaagcaaacggacagatgctgaaatttcctggttttacggttttatac
caggaaagcaaggatgaagaaggggaagaaaaggaaaatgacattcctgatcttatagaa
ggtgaggaattaaaacagaagaaaatagaaccgaagcagcattttacccagccacctcca
agatataccgaagcgagccttgtaaaaactctggaggaaaagggaataggcaggccgagt
acttatgcacccattattactacaatattggcaagaggatatgtagtaaaggacggaaaa
acattaatgcctacagaattgggtaaaatagttaacgatattatgaaaacatatttccag
gatatagttgatgttgagtttactgcccagttggagaaaaagcttgatgacattgaagag
ggatataaaaaatgggtggatgtgatgcagagcttttattctccatttgctaaagtattg
gaagaagcagaagagaagatcggaaatgttgaggttccggatgaagtaactgatgaaatc
tgtgaaaaatgcggaaggaacatggtaataaagatgagtcggtttggcaaatttttagcc
tgtccgggatttcccgaatgcagaaatgcaaggcctattctggaagaggccggagttaaa
tgccctaaatgcggcggtaaggtatatattaaaaaatctaaaaagggtaaaaaatatttg
ggatgcgagaataatcccacctgtagttttatgagctgggatatgccttcgaaagaaagt
tgtcctaaatgcggaaacttcttattgaagaagtatttgggaaagaaagttcaacttaag
tgcagtaatgaagaatgtgactttataaaagatggagaacgaaaaaaggaagagtaa
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