Acetivibrio clariflavus: Clocl_2045
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Entry
Clocl_2045 CDS
T01661
Name
(GenBank) RNA polymerase sigma-I factor
KO
K03093
RNA polymerase sigma-I factor
Organism
ccl
Acetivibrio clariflavus
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccl03021
]
Clocl_2045
Transcription machinery [BR:
ccl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Clocl_2045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
HTH_11
DUF6398
Phage_terminase
DUF3316
HTH_Tnp_ISL3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AEV68643
UniProt:
G8LW39
LinkDB
All DBs
Position
complement(2341056..2341793)
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AA seq
245 aa
AA seq
DB search
MDMWFFGMRTPEKRSFIDILQRIKAGDKLLKDRFISDYKPFIIKSVSQILNNRYIDIENS
EEYSVGLIAFNEAIEKYDKDKKCSFKKFSYQVMQRRLIDYRRKNEKSSKVYPFSYFEEDE
NCDFEYKYLVERDTDHVYNFEIREEFVSFVNKMKDFGITMDDLVKNMPKHRDSRKTCAKI
AKYIAEDDDLFNKFNAKKTIPFKDIADYIDVSQRTVERNRKYIIALVLILKSDLDIIKNY
IKNLE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
gtggacatgtggttttttggcatgcgaacgcccgaaaagagatcttttatagatatattg
cagcgtataaaggctggcgataaattattaaaggacaggtttattagtgattacaaacct
ttcattattaaatctgtttcccaaatactcaacaatagatatatagatatagaaaacagt
gaggaatacagtgttgggttgattgcttttaatgaagctattgaaaaatacgataaggac
aaaaaatgtagttttaagaagttttcataccaggttatgcagcgaaggttaatagattac
cgaagaaagaatgaaaagagctcaaaagtctatccgttttcatattttgaggaggatgaa
aactgcgattttgagtacaaatatttggtagagagagatacagaccatgtttataatttc
gaaatccgagaagagtttgtttcgtttgtgaacaaaatgaaggattttggaataaccatg
gatgatttggtgaaaaacatgcccaaacacagagattccaggaagacttgtgcgaaaatt
gcaaaatatatagctgaggatgacgatttatttaataagtttaatgcaaagaaaactatt
ccgtttaaagatatagctgattatatagatgtaagtcaacgaacagtcgaacgcaacaga
aaatacatcattgctttggtgctaattctgaagagcgatcttgatattataaagaactac
attaaaaatttggagtaa
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