Acetivibrio clariflavus: Clocl_2645
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Entry
Clocl_2645 CDS
T01661
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccl
Acetivibrio clariflavus
Pathway
ccl03030
DNA replication
ccl03410
Base excision repair
ccl03420
Nucleotide excision repair
ccl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Clocl_2645
03410 Base excision repair
Clocl_2645
03420 Nucleotide excision repair
Clocl_2645
03440 Homologous recombination
Clocl_2645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccl03032
]
Clocl_2645
03400 DNA repair and recombination proteins [BR:
ccl03400
]
Clocl_2645
Enzymes [BR:
ccl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Clocl_2645
DNA replication proteins [BR:
ccl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Clocl_2645
DNA repair and recombination proteins [BR:
ccl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Clocl_2645
NER (nucleotide excision repair)
GGR (global genome repair) factors
Clocl_2645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AEV69211
UniProt:
G8M1J6
LinkDB
All DBs
Position
complement(3057910..3060600)
Genome browser
AA seq
896 aa
AA seq
DB search
MNKKKLMVIDGNSILNRAFYGLQGPNLLATSDGLYTNAVYGFINIMNKYIEEENPQYICV
AFDLKAPTFRHKQFDGYKANRKGMPDELRVQVPVIKEVLDAMRIKRLEMEGYEADDILGS
ISLCAQQKGMEVIIITGDRDALQLADKDIRIKIPKTKGGKTETEEYNLETIHGKYKIEPV
QFIDVKALMGDTSDNIPGVPGIGEKTALDLIQNYGTIENLYENVDNITKKALKEKLITYK
EQAFMSKELARIERNMPFLCNIDELARVEFDKPRLYELFKRLEFKSFIEKFGLKDSQNQE
SFKVNIKRIKDKQGILELKNEIFEEKEMSFYYLIDKVDKFTNKLSGISISAKEGNSYYLA
FNEDYNEKEFLEEFKSIFEDSDIKKYGHDLKNFIVYLKNRGIELNGIAFDTMIGAYIINP
SRDTYTISELANDYLGLSVKSVEEMAGKGRNFMPFDAMDEEELKNVAGLYPEVIFKCKNK
IEEKLGENDQIKLYYEIELPLVEVLADMEYYGFKVNVNELMSISRQLDEKIQELTVKIYE
LAGEEFNINSTKQLGVILFEKLELPVIKKTKTGYSTDAEVLEELADKHEIIPKILEYRQL
IKLKSTYIDGLMSVINPVTGKIHSSFNQTVTVTGRISSTEPNLQNIPIKLEMGRNIRKAF
VSSDENYRLVDADYSQIELRVLAHITGDVNMIEAFNKNEDIHASTASKVFGVPINEVTPL
LRSKAKAVNFGIVYGIGDFSLSKDLGITRKEARAYIDGYLEKYANVKKYMHDIVVQGKEF
GFVTTLFGRRRYLPELKSSNFNIRSFGERIAMNTPIQGSAADIIKIAMVKVYKELKARKL
KSRLILQVHDELIIEAHVSEVEEVTTILKESMENAVKLSVPLSVEVKSGSNWYETK
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaaaaattaatggttattgatggaaatagtatattgaacagggctttttat
ggtctgcaaggccctaatcttttggcaacatcggatggattgtatactaatgctgtttat
ggatttataaacataatgaataagtatattgaagaggagaatccacagtacatctgtgtt
gctttcgatttgaaggcacctacattcagacataagcaatttgacggttacaaggcaaat
agaaagggaatgcctgatgaattgagggttcaggtgccggttatcaaggaagtacttgat
gcaatgcgtataaaaagacttgagatggaaggctatgaagctgacgacatacttgggtcc
atatccttgtgtgcacagcaaaaaggtatggaggtaataatcattaccggtgacagagat
gcactacagcttgcagacaaggatataaggattaagatacctaaaactaagggtggtaaa
accgagacagaagagtataatcttgagacaatacatggaaaatataaaattgagcctgtt
cagtttattgatgtcaaagctctgatgggagatacatccgacaatatacccggtgttccg
ggaataggtgaaaagactgctttagatcttattcaaaattacggcaccatcgaaaatttg
tatgagaatgttgacaatattacaaaaaaagcgcttaaagagaagcttataacctataag
gaacaggcttttatgagcaaggaactggccagaattgaaaggaacatgccctttttgtgc
aatattgacgaacttgcaagagtagagtttgataaaccaagactttatgaactttttaag
cgtttggagtttaaaagttttattgaaaaattcggattgaaagacagtcagaatcaggaa
tcttttaaagttaatataaagagaattaaagacaaacaaggaattttggaattaaaaaac
gagattttcgaagaaaaagagatgtccttttattatttgatagataaagttgataagttt
acaaacaaactttcgggtatttctatatcagctaaagagggaaactcgtattatctggca
tttaatgaagattataatgagaaggaatttttagaagaattcaaaagtatttttgaagat
tccgacatcaagaaatacggacatgatctgaagaattttattgtatatttaaagaacaga
gggattgagttaaacggaattgcctttgacaccatgataggggcatatatcataaatcct
tcccgcgacacttataccatctcggaattggcaaacgattatctgggcttaagtgtaaag
tcggtagaagagatggcgggcaagggtaggaattttatgccttttgatgctatggatgag
gaagaacttaaaaatgttgcaggcctgtatccggaagtaatatttaaatgcaagaacaaa
attgaagaaaaacttggagaaaacgatcagataaaactttactatgaaattgagctacca
ttggttgaggttcttgcagatatggaatattacgggtttaaggtcaatgttaatgaactt
atgtccatctcaaggcagttggatgaaaaaatccaggaacttaccgtgaaaatatacgaa
cttgctggggaagagtttaatattaactctaccaaacaattgggtgtaatactgtttgaa
aaactggaactgcctgttataaaaaagactaagacaggatattccaccgatgcagaggtt
ttggaggagcttgccgacaagcatgaaattatacctaaaatccttgagtatcgtcagttg
ataaaattgaagtctacttatattgatggcttgatgtcggttataaatcctgttaccggg
aaaattcattccagttttaaccagactgttactgtaacgggcagaataagcagtacagag
cctaatcttcagaatattcccattaaacttgaaatgggaaggaatataaggaaggctttt
gtatcaagtgatgaaaattacaggttggtggatgccgactactcccagatagagctcaga
gtattggcgcatataaccggcgatgtcaacatgattgaagccttcaataaaaatgaagat
attcatgcttcaacggcttcaaaggtatttggagtgccaattaacgaagtgactcctctg
ttgaggtccaaagcaaaggcggtaaactttggaatagtatatggaattggagatttcagt
ctttcaaaagaccttggcataacaagaaaagaggctagggcgtatattgacgggtatctt
gagaagtatgccaatgtaaaaaagtatatgcatgacattgtagttcagggaaaggaattt
ggctttgtcactacattgtttggcaggagaagatatttgcccgagcttaaatccagcaat
ttcaatatcaggtcttttggcgaaagaatagctatgaatacacctattcaaggaagtgct
gccgatattatcaaaattgcaatggttaaagtatataaagagctaaaggcaagaaaactt
aaatcaaggctgattctgcaggttcacgacgaactcattattgaagcgcatgttagtgaa
gtggaagaagtgacaaccattttgaaagagagcatggaaaatgcagttaaattgagtgtt
cctttaagtgtggaagtaaaatcaggttctaattggtatgagacaaaatag
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