Acetivibrio clariflavus: Clocl_2786
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Entry
Clocl_2786 CDS
T01661
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ccl
Acetivibrio clariflavus
Pathway
ccl03410
Base excision repair
ccl03430
Mismatch repair
ccl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Clocl_2786
03430 Mismatch repair
Clocl_2786
03440 Homologous recombination
Clocl_2786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccl03400
]
Clocl_2786
DNA repair and recombination proteins [BR:
ccl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Clocl_2786
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Clocl_2786
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Clocl_2786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AEV69339
UniProt:
G8M330
LinkDB
All DBs
Position
complement(3242883..3245357)
Genome browser
AA seq
824 aa
AA seq
DB search
MNQSKQWIVSKIYEGSEQEKVHRISQQCKISPLLAKVFISRGIEEEEYIKMFLNPSMDDL
YHPFLLRDMEKAVDRIVSAVKDRERIIIFGDYDVDGITSTSVLYNFLVKCGADVGYYIPD
RLEEGYGLSMGAVRKVIDDGASLIITVDCGVTAFEEVEYIIDNNTDIIITDHHECKEELP
KAYAVVNPCRHDCEYPFKELAGVGVAFKLVQALAIKMELKDPSPDYMDLVALGTVADVVP
LVSENRIIVKYGLKKIENTLNKGLKALMEVSGVKDKEISSYTVGFVLAPRLNAAGRMGDA
TRAVKLLTTDDENEAAAISKELNEQNIYRQETEQEILSDVLSRIESSVDLKKEKVIVVWG
EGWHHGIIGIVASRVVESFHRPCLLIAVEDGLGKGSGRSIEGFNLFEALTHCAGLLEKFG
GHELAAGLTIKEENIEELKKSINEYADKLLKDSDLIPKIKIDVEVKKEDISLDSVRELDL
LSPFGVGNPSPVFAYKNLVIEDIRTVGSDRHVKLKLKDSDSFIDAIGFNRGYLAEIYSKT
DVIDTACSLEINSWNNTENVQLNIRDLKVSEDILVQNRFYYSLDKAVDFTCLYDENSADE
FLENITKVENLQGFRRDFYEGRRTVILVNSINSLKSLTSALDGIKVRYCTAYNTSDSVDD
GDVCILVNPKPEKFDAIPFNRVGIFGEWISKCYLYNIIKRIDLSKLFILDKICFKVDESD
IIVERQDMAIVYRYLRNNFNGSGIIDDLFKFARSVSQSCGRNINYFKVKRILDTFEELNL
LKKSERGKYGMEVSIIDTNGKKADLESSAIFQSFKAFKERIQAV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaagcaaacaatggattgtaagcaaaatatacgaaggaagcgaacaggaaaaa
gttcataggatatcgcagcaatgcaaaatatccccgcttcttgcaaaagtttttataagc
aggggtattgaagaggaagagtacattaagatgtttttaaatccgtcaatggatgatttg
taccatccttttctgcttagggatatggagaaggctgttgacagaatagtaagtgctgtt
aaagacagggaaaggataataattttcggggattatgacgttgacggcataaccagtacg
tctgttttgtacaactttctcgtaaaatgcggggccgatgtgggatattatatacctgac
aggctggaagagggatatggcttgtcaatgggggctgtccggaaggttattgatgacgga
gcttctttgataattaccgttgattgcggcgtaacagcctttgaagaggttgaatatata
attgacaataatacggatataattattaccgaccatcatgagtgcaaggaagagctgcct
aaagcctatgctgtagtaaatccctgcaggcatgattgtgagtatccttttaaggaactg
gccggagtgggtgtggcctttaaactggtacaagccctggcaattaaaatggaacttaaa
gacccatcgccggattatatggatcttgtggctttgggaacggttgcggatgttgttccg
cttgtaagcgagaacaggattattgtaaagtacggccttaaaaagattgaaaatactcta
aataaagggcttaaagctcttatggaggtttcgggagtcaaggacaaggagatttcgtcc
tataccgttggctttgttctggcgccaagactaaatgctgcaggaaggatgggagatgca
acaagagcggtaaagctattgactaccgacgatgagaatgaggccgctgctatttcaaag
gaattgaatgaacagaatatttaccgccaggaaactgaacaggagatactttctgatgta
ttgagcaggatagaaagcagtgttgatttaaagaaggaaaaagttatagttgtctggggc
gaaggatggcatcacggtattataggtattgtggcctcaagagtggttgaaagttttcac
cgtccctgccttttgatagcggtggaggatggactgggcaaaggctcgggcagaagtata
gagggttttaacctgtttgaagcactgacccactgtgcaggtctgcttgagaaatttgga
ggccatgagctggcagcaggacttacaattaaagaagagaatattgaagaactgaaaaaa
tcgataaatgaatatgccgataagctattgaaggattcggatttgattccgaaaatcaag
attgatgttgaggtaaaaaaggaagatatttcgttggacagtgtaagagaactggatttg
ctttcaccctttggcgtgggtaatccaagtccggtctttgcttacaaaaaccttgtgatt
gaagatataaggacagttggcagtgacaggcatgtaaagctgaagcttaaggatagtgat
agctttattgatgctataggttttaacagaggttatcttgctgaaatttacagtaaaacc
gatgttatcgatacggcatgttctttggagattaattcatggaacaataccgaaaacgta
cagcttaatataagggatttaaaggtcagtgaggatatacttgttcaaaacaggttttac
tatagtttggacaaggctgttgactttacctgcctttatgatgagaacagtgcagatgag
ttccttgagaatattacaaaagtagagaatttgcaaggttttagacgggatttttatgaa
ggcagaagaacagtaatccttgtaaattcaataaacagtctgaaatcccttacctctgct
ttggacggcataaaagtccggtattgtacagcttacaatacatcggacagtgttgatgac
ggggatgtatgtattttggtaaatccaaagcccgaaaagttcgatgccataccttttaac
agggtgggtatattcggtgagtggatttcaaaatgttatctttataatataattaagagg
attgacttaagcaaattatttattttggataaaatctgttttaaggttgatgaaagtgat
ataattgtggaaagacaagatatggctatagtttaccggtatttaaggaataattttaat
ggcagcggtattattgatgatttgttcaaatttgcccgttctgtttcgcaaagttgcggc
agaaatattaactactttaaagtaaaaaggattcttgacacctttgaagaattaaattta
ttaaaaaaatcggaacgcggcaaatacggtatggaagtatcaataattgatacgaatggg
aaaaaagctgatcttgaaagttcggctatttttcaaagttttaaagcttttaaggaacgg
attcaggccgtttaa
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