Acetivibrio clariflavus: Clocl_2877
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Entry
Clocl_2877 CDS
T01661
Name
(GenBank) pseudouridine synthase family protein
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ccl
Acetivibrio clariflavus
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccl03009
]
Clocl_2877
Enzymes [BR:
ccl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Clocl_2877
Ribosome biogenesis [BR:
ccl03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Clocl_2877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AEV69424
UniProt:
G8LSS2
LinkDB
All DBs
Position
complement(3350850..3351602)
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AA seq
250 aa
AA seq
DB search
MRETQRVDKILSNLGFGTRKQIKQLIRNGEVKVDGQVINDSGMHIDPKKSQIEISGQRLK
YRQFIYIMMNKPAGVISATFDNRHKTVIDILPDEYKCFNLFPVGRLDIDTEGLLLLTNDG
QLAHELLSPKKHVPKKYFAFIEGSVSQDDVKKFEEGITLDDGYKTLPAELYILDSGVNSS
VDVVIYEGKFHQIKRMFEAVGKKVKFLKRIAMGSLVLDKELAPGECRELTEEELSNLISE
VKGKNTDKLN
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagagagacgcaaagggtggacaagatattatccaatttgggttttggtacaagaaaa
cagataaaacagttaataaggaacggagaagtaaaagttgacggtcaagtaataaatgac
agcggaatgcatatagatccaaagaaaagccagatagaaatatcgggccagaggcttaaa
tacaggcagtttatctatattatgatgaataagccggcaggagtgatttcggctactttt
gacaacaggcacaaaactgtaattgatattttgccggatgaatacaagtgttttaacctg
tttcccgtcggaaggcttgatatagataccgagggacttttacttttgactaatgacggc
caactggcccatgagctcttatcaccgaaaaaacatgtgccaaaaaaatattttgctttt
atagaagggtcagtttcgcaggacgatgtcaaaaagtttgaagagggaataactttggat
gatggttataaaacccttcctgccgaactttacatattggacagtggtgttaattcaagc
gttgatgtggtaatatatgaaggcaagttccatcagattaaaaggatgtttgaagctgtc
ggcaagaaagttaagtttttaaagagaattgccatgggaagtctggtgcttgacaaagaa
cttgctccgggtgaatgccgtgaattgaccgaggaagagctttcaaatctgatcagtgaa
gtaaaaggtaaaaatacagacaaattgaattaa
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