Acetivibrio clariflavus: Clocl_3240
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Entry
Clocl_3240 CDS
T01661
Name
(GenBank) DNA helicase, Rad3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ccl
Acetivibrio clariflavus
Pathway
ccl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Clocl_3240
09124 Replication and repair
03420 Nucleotide excision repair
Clocl_3240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccl03021
]
Clocl_3240
03036 Chromosome and associated proteins [BR:
ccl03036
]
Clocl_3240
03400 DNA repair and recombination proteins [BR:
ccl03400
]
Clocl_3240
Enzymes [BR:
ccl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Clocl_3240
Transcription machinery [BR:
ccl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Clocl_3240
Chromosome and associated proteins [BR:
ccl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Clocl_3240
DNA repair and recombination proteins [BR:
ccl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Clocl_3240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEV69755
UniProt:
G8LWA8
LinkDB
All DBs
Position
complement(3788668..3791022)
Genome browser
AA seq
784 aa
AA seq
DB search
MNTEKKEIKVSVRNLVEFLLRAGDIDSSFFRINRAVEGTRIHKKIQKAQKECYRPEVPLK
YSIDYREFVLTVEGRADGIIEDSDGVTIDEIKSTMSPLEIIDENYNEMHWAQAKCYAYIY
AVQNNIEKVNIRLTYCHLDTEEIKYLNKSFSVEQLKDFFDQLAQNYYSWAKLEYDWQLER
DESIRKLTFPFDMYRKGQRELAVAVYKTITSGKNIFVQAPTGIGKTISTLFPSIKAMGEG
NTSKIFYLTAKTITRSVAEEAFLIMRKKGLKFRAITLTAKEKICIKEKSSCNPADCEVAK
GHFDRINSAIMDILAHEEELKRETIEKYAAKHKVCPFEFSLDLTLWADAVICDYNYVFDP
RVYLKRFFTDKGDYIFLIDEAHNLVDRAREMYSAEIYKKPVLKMKKEMKEIAPKISKALN
RINTFMLNKKKLCNEKGFYVSKEGDKEIYSILRMFVSECEAYFAKNENIKAGDELLELYF
NALAFIRICELYDERYVTYVEIQENDVKLKLFCLDPSYLLHEALKKGKSGVFFSATLIPL
EYYRGILGGSAEDYIMSIESPFNLENRKLLVADYISTRYANRERSYKAIVESIWNLIKCK
CGNYMVFFPSYQYMNTVYELFGSEHPDVKVHVQAASMTEEEREGFLALFVPQPDVTTIGF
CVMGGIFSEGIDLKNDRLIGTVIVGVGLPQVCLERDIIREYFNDRNNAGFEYAYMFPGMN
KVMQAAGRVIRSETDRGIILLIDERFTSRNYLKLFPREWFPYTRVIKADDITKFANEFWN
KGDT
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaatacggagaaaaaagagataaaagtatctgtacgcaatctggtggagttccttttg
cgtgcaggtgatatcgacagcagcttttttagaattaatagagctgttgagggaaccaga
atccacaaaaagattcagaaagcgcagaaggaatgttataggccggaagttcctttgaaa
tacagtattgattaccgggagtttgtattgactgttgaaggccgtgccgatggaattatt
gaagacagtgacggtgttacaattgacgagataaaaagcacaatgtctccccttgagata
atagatgaaaactataatgagatgcattgggcacaggcaaagtgttatgcctatatttac
gctgtgcaaaataatattgaaaaggttaatataaggcttacttattgccatttggatact
gaagaaatcaaatatttgaataaaagtttcagtgttgaacagctaaaggacttttttgac
caactggctcaaaattattatagctgggccaagcttgaatatgattggcagttggaaagg
gatgagtccatacggaaattgacatttccttttgacatgtatagaaaaggtcagagagaa
cttgctgttgccgtttataagaccattacttcaggcaaaaatatatttgtacaggcacca
acaggcataggaaagaccatttcgacacttttcccttcgataaaagcaatgggcgaaggc
aatacctcaaagatattctatcttactgcaaagactattaccagaagtgtggccgaggaa
gcttttttaataatgaggaaaaagggacttaagtttagggcaattacccttacagcaaag
gaaaaaatctgtatcaaggaaaagtccagttgcaatcctgccgactgtgaagtggcaaag
gggcactttgacagaattaacagtgccattatggatatattggctcatgaagaggaatta
aaaagagaaaccattgaaaaatatgctgctaaacataaagtttgtccttttgaattttct
ttggatctgaccctttgggctgatgcagttatttgtgactataactacgtatttgatccg
agagtgtatcttaaaaggttttttaccgataaaggggattatatttttttaattgatgag
gcacacaatttggtggacagggcaagggaaatgtattcggcagaaatttataaaaagcct
gtgcttaagatgaaaaaggaaatgaaggaaattgcgcctaaaatatcaaaagcacttaac
aggataaatacttttatgctcaataaaaagaagctatgcaatgaaaaaggtttttatgtg
agcaaagaaggcgataaagagatttactccattttgagaatgtttgtaagtgagtgtgag
gcgtattttgcaaaaaatgagaatataaaggcaggagacgaactgctggagctatatttt
aatgcactggcattcataaggatttgtgaactctatgatgagagatatgttacttatgtt
gagatacaggaaaacgatgtaaaacttaaactgttttgtcttgatccttcttaccttttg
catgaagctttaaaaaaaggaaagagcggcgtgtttttttccgcaacccttattcctctg
gaatattacagggggattttgggaggaagcgcagaggactatataatgagcatagaatct
ccttttaaccttgaaaacagaaagcttttggtggccgattatatctctacaaggtatgca
aacagggaaaggagctataaagctatagttgagtctatatggaatttaataaagtgtaaa
tgcggaaattacatggtgtttttcccgtcttatcagtatatgaatacagtgtatgagttg
tttggcagtgaacatcccgatgtaaaggtgcatgttcaagcggcttccatgacagaggaa
gaacgggaaggttttctcgccctttttgttccccagccggatgttaccacaatcggtttt
tgcgtcatggggggaatcttttccgaaggtatagatttaaaaaacgaccgtttgatagga
acggtcatcgtgggagtcgggttaccgcaggtctgtctggaaagggatattataagagag
tattttaatgatagaaacaatgcaggatttgaatatgcttatatgtttcccgggatgaac
aaggttatgcaggcggcaggcagggttataaggtctgagaccgacaggggaattattttg
cttatcgatgagaggtttaccagcaggaattacctaaagctgtttccaagggagtggttt
ccctatacgagagtaataaaagccgatgatataactaagtttgccaatgaattttggaac
aaaggggatacttga
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