Acetivibrio clariflavus: Clocl_3908
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Entry
Clocl_3908 CDS
T01661
Name
(GenBank) RNA polymerase sigma-70 factor, sigma-B/F/G subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
ccl
Acetivibrio clariflavus
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccl03021
]
Clocl_3908
Transcription machinery [BR:
ccl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Clocl_3908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_3
HTH_23
HTH_10
Sigma70_ECF
HTH_17
MarR
HTH_28
KORA
HTH_24
HTH_Mga
HTH_19
NirdL-like_HTH
HTH_37
HTH_50
HTH_31
MarR_2
DUF1492
Motif
Other DBs
NCBI-ProteinID:
AEV70348
UniProt:
G8M2H8
LinkDB
All DBs
Position
complement(4519441..4520199)
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AA seq
252 aa
AA seq
DB search
MTQNIDNIYKTNDDSNDLFVEFKNTKSVEVRNEIVKKYLYLAEIISKKFVNRGVDYEDIY
QVASIALIKAVERFDVDKGVKFTSFATPTIIGEIKRFFRDKASVIRIPRRIYEVYQKVTH
AREILTQELSRPPRIDEIAKYLNISEETVMEIIESNNAYNMQSFDQNVYNDDDLELHETI
GEEDTTFEKIENRDFLIKSLDKFNDAEKSFIEMRYFNNKTQKEIAEKLGVSQMYVSRLEK
KVLEKFRRLLIK
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgacacagaacattgataacatatacaagacaaatgatgacagcaatgatttgtttgtg
gagtttaagaatacaaagagtgtagaggtcagaaatgagattgtaaaaaaatatctatat
cttgctgaaataatttcaaaaaagttcgtcaatagaggtgttgattacgaggacatttat
caagtagcttctattgcattgataaaagctgttgagcgttttgatgtggataaaggagtc
aaatttaccagctttgcaactcccactataataggtgagattaaaaggtttttcagggat
aaagcatctgtaataagaatacccagaagaatatatgaagtataccaaaaagtcactcat
gctcgtgagattttaacccaggagttgtccagacctccgagaattgatgaaatagcaaaa
tatcttaatatcagtgaagaaactgttatggagataattgaatccaacaatgcatataat
atgcaatcttttgatcagaatgtttacaatgatgatgaccttgagctgcatgaaactatt
ggtgaagaggatacaacttttgaaaaaattgaaaatagggattttttaatcaaaagcctt
gataaattcaacgatgctgaaaaatcattcattgaaatgagatactttaacaacaagaca
cagaaagaaattgccgagaaattgggagtgtcgcaaatgtatgtgtctcgtttggaaaaa
aaggttttggaaaaattccgcaggttgctgattaaataa
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