Acetivibrio clariflavus: Clocl_3918
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Entry
Clocl_3918 CDS
T01661
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ccl
Acetivibrio clariflavus
Pathway
ccl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Clocl_3918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccl03019
]
Clocl_3918
03110 Chaperones and folding catalysts [BR:
ccl03110
]
Clocl_3918
03029 Mitochondrial biogenesis [BR:
ccl03029
]
Clocl_3918
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccl04147
]
Clocl_3918
Enzymes [BR:
ccl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Clocl_3918
Messenger RNA biogenesis [BR:
ccl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Clocl_3918
Chaperones and folding catalysts [BR:
ccl03110
]
Heat shock proteins
HSP60 / Chaperonin
Clocl_3918
Mitochondrial biogenesis [BR:
ccl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Clocl_3918
Exosome [BR:
ccl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Clocl_3918
Exosomal proteins of other body fluids (saliva and urine)
Clocl_3918
Exosomal proteins of breast cancer cells
Clocl_3918
Exosomal proteins of colorectal cancer cells
Clocl_3918
Exosomal proteins of bladder cancer cells
Clocl_3918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEV70358
UniProt:
G8M2I8
LinkDB
All DBs
Position
complement(4532396..4534033)
Genome browser
AA seq
545 aa
AA seq
DB search
MAKEIKFGEDARRALEAGVNKLADTVKVTLGPKGRNVVLDKKFGSPMITNDGVTIAKEIE
LDDPFENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVAAGANPMILRKGIA
KAVDAAVEGIKEVSQKVKGKEDIARVAAISANDEVIGNLIADAMEKVTNDGVITVEESKT
MGTSLEVVEGMQFDRGYVSAYMVTDTEKMEAVLDDPYILITDKKISNIQEILPILEQIVQ
QGKKLVIIAEDVEGEALGTLVVNKLRGTFTCVAVKAPGFGDRRKAMLQDIAILTGGEVIS
EEVGLDLKETKLEQLGRARQVKVQKENTIIVDGAGSQEEIKKRIASIKAQIEETTSDFDR
EKLQERLAKLSGGVAVIQVGAATETEMKEKKLRIEDALAATKAAVEEGIVAGGGTALVNA
IPKVEKLLDTVSGDEKTGVQIILRVLEEPVRQIAANAGLEGSVIVEKLKSSEPGIGFDAL
NEKYVNMIEAGIVDPAKVTRSALQNAASVASMVLTTESIVADKPEKEAAGAGMAGGMGGG
MGGMY
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaataaaatttggtgaagatgctagaagagcgcttgaagctggtgttaat
aaattagcagacacagttaaagtaacccttggtcctaaaggaagaaatgttgttttagat
aaaaaattcggttctccgatgatcacaaatgatggagttacaatagcaaaagaaattgaa
cttgatgatccgtttgaaaatatgggtgcacagcttgttaaagaagttgctacaaagaca
aatgatgtagcaggagacggaacaactacagcaacacttcttgcacaggcaataataaga
gaaggcttgaagaatgttgcagctggtgcaaatccgatgatactcagaaaaggtatagct
aaagctgttgatgcagcagttgagggaattaaagaagttagccagaaagtaaaaggtaag
gaagacattgcaagagttgcagcaatttcagctaatgatgaagttataggaaaccttatt
gctgatgcaatggaaaaagttacaaatgacggtgttataactgttgaagaatccaagact
atgggaacaagtcttgaagtagttgaaggtatgcagtttgacagaggttatgtatctgca
tacatggttactgatacagaaaaaatggaagctgttttggatgatccgtatattttaatc
acagataaaaaaatcagcaatattcaggaaatccttcctatattggaacaaatcgttcag
cagggcaagaaacttgttattattgctgaagacgttgaaggtgaagcactcggtacatta
gtagttaataaattgagaggaacatttacttgcgtagctgttaaagcgccaggatttggt
gacagaagaaaggctatgcttcaggatatagcaatattaactggtggagaagttatctcc
gaagaagttggtttggacttaaaagaaactaaacttgaacagttaggtagagcaagacag
gttaaagtacagaaagaaaatacaattatagttgacggtgcaggcagtcaggaagaaatt
aagaagagaattgcttctataaaagcacaaattgaagaaacaacttcagatttcgataga
gaaaaattacaggaaagacttgctaaactttccggtggtgtagcagttatccaagttggt
gctgcaacagaaactgaaatgaaagaaaagaaattgagaatagaagatgctttagctgct
acaaaagctgctgttgaagaaggtattgtagcaggtggaggaacagctttagtaaatgct
attccaaaagttgaaaaattgttagacactgtatccggagatgaaaagacaggtgtacag
attattttgagagttttggaagagcctgttagacaaatagctgcaaatgctggtcttgaa
ggttcagttatagttgaaaagctcaaatcaagtgaacctggtataggatttgatgctctg
aatgaaaaatatgtaaatatgatagaagctggtatagttgaccctgcaaaggttacaaga
tctgcattgcagaatgcagcatcagttgcatcaatggttcttacaacagagtcaattgtt
gccgataagcctgaaaaagaagccgcaggtgctggaatggccggcggaatgggcggcgga
atgggtggaatgtactaa
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